Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq177 167 3e-36
seq122 147 3e-30
>seq177
Length=464056
Score = 167 bits (184), Expect = 3e-36
Identities = 551/850 (65%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| || ||||| || |||||||| || || || ||||| ||| || || ||
Sbjct 196571 TTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 196512
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || || || || || || || || | | || | |
Sbjct 196511 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCTAACAGT 196452
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| | ||| || || ||||| |||||| | ||| | || ||||| || | ||
Sbjct 196451 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 196392
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||| ||||| || || | ||||| | ||||| |||||||| || || ||
Sbjct 196391 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 196333
Query 39566 GATGTT-ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624
| | | || | | | |||| | | | ||| |||| | |||||||||
Sbjct 196332 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 196273
Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684
||| || | ||||||||| | || | ||||| || |||||||| || | |||
Sbjct 196272 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 196213
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
|||||||| || || ||||| || || ||||||||||||||||| |||||||| || ||
Sbjct 196212 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 196153
Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTT 39801
|| || |||||||||| || | || | | | | | | | |||||
Sbjct 196152 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 196093
Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
| ||||| ||||| ||| | | || || || | || || ||||| || || |
Sbjct 196092 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGT- 196034
Query 39862 ATGTT-TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAAT 39920
||||| | | || | | |||||||| || | || ||| | || || |
Sbjct 196033 ATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGT 195974
Query 39921 GGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCT 39980
||||||| || ||| ||||| || ||||| || |||| ||| || | || || ||||
Sbjct 195973 GGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCT 195914
Query 39981 CTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATG 40040
| || | || | || | | || || || || || ||||| ||||| || ||||
Sbjct 195913 CAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 195854
Query 40041 CCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCATTGA 40097
| | || ||| || || || ||| ||| | | | || |||||||| | ||
Sbjct 195853 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGA 195794
Query 40098 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACA 40157
||| || || | ||| | || ||||||||||| || || ||||| |||||||||||||
Sbjct 195793 GATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACA 195734
Query 40158 TGTTCCATAT 40167
| | ||||||
Sbjct 195733 TTTGCCATAT 195724
>seq122
Length=596269
Score = 147 bits (162), Expect = 3e-30
Identities = 551/858 (64%), Gaps = 22/858 (3%)
Strand=Plus/Plus
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336
|| || ||||| || || || ||||||| | | | || | || ||||| || ||
Sbjct 542031 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 542090
Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396
| |||| | ||||| || || ||||| | |||||| ||||| ||| |||||||
Sbjct 542091 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 542150
Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456
||||| ||||| || || || || || || |||| | |||| ||||| | ||| |
Sbjct 542151 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 542210
Query 69457 ACCCTAGCATTTA-----TTACGGTC-TTGTAACGCTTCTCTTTTTCATATTGTGTATAT 69510
| |||| | | |||| | ||| ||||||| | |||| | ||
Sbjct 542211 TTCTGAGCACGAACCGTCTCACGGCCCTTGC----CTTCTCTCT--CATAACGCTCGTAC 542264
Query 69511 AGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATC 69570
||| | ||| || || || ||||||| || ||||| ||||| || || ||||||
Sbjct 542265 AGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATC 542324
Query 69571 AATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCT 69630
| | ||| | | | | || || | |||||| |||||||||||||| |||||
Sbjct 542325 AGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCG 542384
Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690
|| | ||| | | | | |||||| ||||| || || ||| || | |||
Sbjct 542385 TAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAAC 542444
Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750
| ||| | || | |||||| || || || || || || | | || || || || ||
Sbjct 542445 TGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTG 542504
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| ||||| || | ||| | |||||||| |||||||||| ||||| || | || |||
Sbjct 542505 CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCG 542564
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|| ||| | || ||||| || ||| || ||| | || | || || || |
Sbjct 542565 TTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGA 542624
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
||||| || || || || | || ||||| | ||||| || | || || || |||
Sbjct 542625 AGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATA 542684
Query 69931 CCCTCTATGCTATCATCTATCATG----TTAAGAAGAAAACAGCTAGACATTTGATGATG 69986
|| || ||||| ||||| ||||| |||||| | ||||| || ||
Sbjct 542685 CCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG----CTGCGCCTG 542740
Query 69987 TATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCA 70045
| || || ||| | || | ||| || || || || ||||| | || || | | |
Sbjct 542741 TGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTA 542800
Query 70046 GATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCA 70105
| |||||||| ||||| |||| ||| || || | |||||| || | || |||||||
Sbjct 542801 G-TTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCA 542859
Query 70106 TCAACATATGCTGAGGTC 70123
| | ||| || || ||||
Sbjct 542860 TGATCATCTGTTGCGGTC 542877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906610478200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |