Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq122 197 2e-45
seq255 176 5e-39
seq111 127 2e-24
seq190 104 3e-17
seq110 98.7 1e-15
>seq122
Length=596269
Score = 197 bits (218), Expect = 2e-45
Identities = 803/1242 (65%), Gaps = 39/1242 (3%)
Strand=Plus/Plus
Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598
||||||||||||| ||| | ||||| ||| | ||||| || | | | ||||||||
Sbjct 541656 CCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAA 541715
Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658
|| || | ||| || ||||| || || || ||| || || ||||| ||| ||||
Sbjct 541716 GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCA 541775
Query 80659 AAGACGCCCTTGTTCA-CACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCAT 80717
|| | | || | | || | |||| || |||||| | || || | ||
Sbjct 541776 AAAATCTGGATATTAAGCTCCTTG-GCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAA 541834
Query 80718 GAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG 80777
||| | ||||| || || | || || | | || || |||||||| ||| | ||
Sbjct 541835 GAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT-GCTCT 541893
Query 80778 CTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836
||| ||||| || | |||||| |||| | |||||| ||||||||| ||||| |
Sbjct 541894 TTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGA 541953
Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT---TGGTTCCCCTTCACAA--- 80890
| || || || || |||||||||| ||||| || | |||| | | | |
Sbjct 541954 CCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGT 542013
Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACT 80950
| | || || || || ||||||||||| || || ||||| || | | | | |||
Sbjct 542014 AGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACT 542073
Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010
| | ||| || |||||||||||||| ||| || || || || || ||||| || ||
Sbjct 542074 CCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCT 542133
Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070
|| |||| ||||||||||| ||| | || || ||||||||| ||| | || ||
Sbjct 542134 TGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGA 542193
Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130
| || || | ||| || | | || ||| || ||| |||||||| | |||
Sbjct 542194 GAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCAT 542253
Query 81131 ACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCG 81189
| |||| ||| || | ||||| | |||||| || || | || | ||||| |||
Sbjct 542254 AACGCTCGTACAGC-TCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCG 542312
Query 81190 TTAGGGCACATCAGGTGCCAGTCGGTGTCGTTC---TCTACAGCCTTCATGAAAGCG-TC 81245
|| ||||||||||| ||| ||| ||||| || ||| || ||| |||| | ||
Sbjct 542313 TTGGGGCACATCAGAGTCCA---AGTGCCGTTCTGTTCGACACGCTGCAT-AAAGAGATC 542368
Query 81246 AGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGA 81304
|| |||||||| ||| ||||| ||||| ||| || | || || | || |||||
Sbjct 542369 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCA-CGAACTTCTTCCTTTCCATGGTTCT 542427
Query 81305 GGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG 81364
||| | || | || | ||||| ||| |||||||| ||||| || || | ||| | |
Sbjct 542428 TGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAG 542487
Query 81365 ACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACAC 81418
| ||| |||| ||||||||||| |||||||| ||||| |||| | || |
Sbjct 542488 -CACCT--GGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTC 542544
Query 81419 GCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGG 81478
| | ||| || | | ||| | || ||||| || || | || || || |||
Sbjct 542545 GTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGG 542604
Query 81479 CGCGCACCTTGCTGA--TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACA 81536
| | | ||| ||| || |||||| || || || | ||| || ||| |||||
Sbjct 542605 CCCTGATGTTG-TGAACATG-AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACA 542662
Query 81537 CCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACA 81596
|| | ||| || || || || || ||||| || | |||||| | | |||||| ||
Sbjct 542663 TATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCA 542722
Query 81597 GCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATG 81654
| || | || | || | | | | || ||| |||| |||||||| | || || ||
Sbjct 542723 GGATGCTAGCT--GCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTG 542780
Query 81655 AAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGA 81714
|| || ||||| || || || || | | | ||| || || || |||
Sbjct 542781 AAGTACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGA 542840
Query 81715 ATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756
|| |||| ||| |||||||| | ||| | || || |||||
Sbjct 542841 ATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 542882
>seq255
Length=1030235
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||||| |
Sbjct 662668 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 662609
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| || || || ||||||
Sbjct 662608 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 662549
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || |||||||| || ||||| |||||||||| |||||| || | ||||| ||
Sbjct 662548 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACAAC 662489
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || ||||| ||||| || | || | ||||| || |||||
Sbjct 662488 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGG 662442
Score = 141 bits (156), Expect = 1e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| ||||| || ||||||||||| || | ||| | ||| |||||
Sbjct 662872 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 662813
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||| ||||| || ||||| || |||||||| || | ||||| || || |||
Sbjct 662812 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 662753
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||| | ||| ||||| | ||||| || | || ||||| |||||| |||
Sbjct 662752 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 662693
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | |||||||| |||||
Sbjct 662692 CTCGTCCTCCGTCTTCGTGGTGG 662670
Score = 132 bits (146), Expect = 5e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| || ||||||||||| || || || || || || |||
Sbjct 662440 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 662381
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||||||||| || || || ||||||
Sbjct 662380 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 662321
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||| | || || || | || || ||
Sbjct 662320 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 662261
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| |||||||| || | || ||||||| || || || |||
Sbjct 662260 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGGCCAA 662210
>seq111
Length=1775037
Score = 127 bits (140), Expect = 2e-24
Identities = 141/188 (75%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 27408 GCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGA 27467
||| | ||| || ||||| || || |||||||| || || || ||||| ||||| | ||
Sbjct 733727 GCACAGCTTCGTAAAGACCCTCACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGA 733786
Query 27468 TAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCA 27527
| ||| | ||| | ||| || || ||||||||||||||||| || || ||||||||
Sbjct 733787 CACCATCGACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCA 733846
Query 27528 GCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGT 27587
|||| | || || ||||| ||||| | ||||||| ||| ||||| | ||||| || |
Sbjct 733847 GCGTTTGATCTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACAT 733906
Query 27588 CCAAAAGG 27595
||| ||||
Sbjct 733907 CCAGAAGG 733914
>seq190
Length=1563660
Score = 104 bits (114), Expect = 3e-17
Identities = 279/423 (66%), Gaps = 8/423 (2%)
Strand=Plus/Minus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043
|||||| | ||||| ||||| || || || ||| | || || |||||| |
Sbjct 79673 GACGGCTTGAAGCCGGGTCAGCGAAAAGTCATGTACACATGTTTCCGCCGCAACCTGAAG 79614
Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103
| || | ||||||| | ||||| | || | || | | | || || || | ||
Sbjct 79613 AAAGATGTCAAGGTGGTGGAGCTGGCTGGTTCAGTCTCCGGCCTCACCGCATACCCGTAC 79554
Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163
|| ||| | || || ||| ||||| || || ||||||||||| || ||| | ||
Sbjct 79553 GGTGAGACATCACTGCAGCAAACCATCATCGGTCTGGCTCAGAACTTCGTGGGTTCCAAC 79494
Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223
||| ||||| | |||||||| ||| | ||||| | || || |||||||| |||
Sbjct 79493 AACATGAACATCCTCGAGCCGAGTGGCAATTTTGGATCACGTCTGCAAGGTGGCAACGAT 79434
Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279
|| || || | |||||||| | ||| | ||||| ||| | ||| | || ||| ||
Sbjct 79433 GCGGCCAGTCCTCGTTACATATACACGAGACTGTCTC-CACTTGCGA-GGGC--GATCTT 79378
Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339
||| | || || ||| |||| | |||||| || ||||| || |||| ||
Sbjct 79377 TCACCAGAGCGATGAAGCGCTGCTGACGTACAACACCGACGACGGCAAGACCATCGAACC 79318
Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399
|| | | || ||| | | ||||||||| || | |||||||| || |||||||||||
Sbjct 79317 GGAGATGTATGTTCCAATCTTGCCGATGATCCTGATCAACGGTGCTGATGGCATCGGAAC 79258
Query 32400 GGG 32402
||
Sbjct 79257 CGG 79255
>seq110
Length=596651
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || ||||||||||| | || || || || ||||| ||||||
Sbjct 202873 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 202932
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || ||||| | ||||| || | || ||||| ||| || || || ||| |
Sbjct 202933 GATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGAGAGCACCCTCCACCTCGTCCTC 202992
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 202993 CGTCTGCGTGGTGG 203006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308582135600
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