Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07- 28] 255 sequences; 30,221,182 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq255 134 3e-26 seq226 134 3e-26 seq111 98.7 2e-15 seq222 84.2 5e-11 >seq255 Length=1030235 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||| |||||||| || || |||| |||||||| | | || Sbjct 662219 ACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGT 662278 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||| || || || || Sbjct 662279 CCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCC 662338 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| || ||||| ||||| || | |||||| || | Sbjct 662339 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAG 662398 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | |||||| Sbjct 662399 TGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662440 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||||||||| |||||||| |||| ||||| |||| || ||| | ||||| Sbjct 662457 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 662516 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || || || ||||| || || ||||| |||||||| Sbjct 662517 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 662576 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || || || || | ||||| ||| Sbjct 662577 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 662636 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 662637 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 662668 Score = 118 bits (130), Expect = 3e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || ||||||||| || || || | ||||| |||| || || Sbjct 662675 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGT 662734 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || ||||| || | ||||| ||||| || ||||| || Sbjct 662735 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 662794 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||||||| ||||||||||| || | || || || | Sbjct 662795 TTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 662854 Query 225672 CGTGATCGTCTTGCCCGT 225689 || || |||||||| || Sbjct 662855 GGTAATGGTCTTGCCGGT 662872 >seq226 Length=15346 Score = 134 bits (148), Expect = 3e-26 Identities = 195/273 (71%), Gaps = 3/273 (1%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| |||||||||| | ||||||||| | ||| || |||||| | | Sbjct 5627 ACATTATACTTAATATTTGCTTTATTTTCTGGTTTAGCAGGAACAGCATTTTCAGTTTTA 5568 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 ||| | |||||| || | | || ||| |||| ||| || | ||| ||| | || Sbjct 5567 ATACGTTTAGAACTATCAGGACCTGGTGTTCAA-TATATAGCAG--ATAATCAATTATAT 5511 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 ||| ||| || || || ||||| | || ||||| |||||| | |||||||| | |||| Sbjct 5510 AACAGTATAATAACAGCTCATGCTATAGTGATGATATTCTTTATGGTTATGCCAGCTATG 5451 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || || || ||||| |||| || | |||||| | | |||| || |||||||| ||| Sbjct 5450 ATCGGAGGATTCGGTAATTTCTTATTACCTTTATTAGTAGGTGGACCAGATATGGCGTTT 5391 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| | || || |||||||||||||||||| Sbjct 5390 CCAAGATTAAATAACATAAGTTTTTGATTACTA 5358 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || || ||||| || |||||||| | |||||| || | |||||||| || || |||| | Sbjct 4948 TCTGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAATATAGGATCTCCACCTCCTGCT 5007 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 |||||||| ||| |||||||||||||| |||||||| Sbjct 5008 ACTTCAAAAAATGAAGTGTTAAAATTTCTATCTGTTAAAAC 5048 >seq111 Length=1775037 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| | || | ||||| || | |||||| ||||||||||| Sbjct 733912 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 733853 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || || ||||| || || || || |||||||| |||||||| ||| ||| ||| Sbjct 733852 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 733793 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | |||||| |||||||| || | || |||| ||| Sbjct 733792 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 733734 >seq222 Length=22645 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/103 (80%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||||||||||||||||||||||||||| | ||||| || || || |||| Sbjct 4908 TTCAGGGTGACCAAAAAATCAGAATAAATGTTGATATAAAATAGGGTCTCCACCACCTGC 4967 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 ||||| |||| | || ||||| ||||| || ||||| || Sbjct 4968 AACTTCAAAGAAAGAT-GTGTTAAAGTTTCTGTCTGTTAATAC 5009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527303776970