Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236655.1_202017-07-
28] 255 sequences; 30,221,182 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq255 134 3e-26
seq226 134 3e-26
seq111 98.7 2e-15
seq222 84.2 5e-11
>seq255
Length=1030235
Score = 134 bits (148), Expect = 3e-26
Identities = 163/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | ||| |||||||| || || |||| |||||||| | | ||
Sbjct 662219 ACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGT 662278
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 662279 CCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCC 662338
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||| || ||||| ||||| || | |||||| || |
Sbjct 662339 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAG 662398
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | ||||||
Sbjct 662399 TGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 662440
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||||||||| |||||||| |||| ||||| |||| || ||| | |||||
Sbjct 662457 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 662516
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || || || || || || ||||| || || ||||| ||||||||
Sbjct 662517 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 662576
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || || || || | ||||| |||
Sbjct 662577 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 662636
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| || | ||| | |||||
Sbjct 662637 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 662668
Score = 118 bits (130), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| || ||||||||| || || || | ||||| |||| || ||
Sbjct 662675 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGT 662734
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || ||||| || | ||||| ||||| || ||||| ||
Sbjct 662735 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 662794
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| ||||||| ||||||||||| || | || || || |
Sbjct 662795 TTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 662854
Query 225672 CGTGATCGTCTTGCCCGT 225689
|| || |||||||| ||
Sbjct 662855 GGTAATGGTCTTGCCGGT 662872
>seq226
Length=15346
Score = 134 bits (148), Expect = 3e-26
Identities = 195/273 (71%), Gaps = 3/273 (1%)
Strand=Plus/Minus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||| |||||||||| | ||||||||| | ||| || |||||| | |
Sbjct 5627 ACATTATACTTAATATTTGCTTTATTTTCTGGTTTAGCAGGAACAGCATTTTCAGTTTTA 5568
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560
||| | |||||| || | | || ||| |||| ||| || | ||| ||| | ||
Sbjct 5567 ATACGTTTAGAACTATCAGGACCTGGTGTTCAA-TATATAGCAG--ATAATCAATTATAT 5511
Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620
||| ||| || || || ||||| | || ||||| |||||| | |||||||| | ||||
Sbjct 5510 AACAGTATAATAACAGCTCATGCTATAGTGATGATATTCTTTATGGTTATGCCAGCTATG 5451
Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680
|| || || ||||| |||| || | |||||| | | |||| || |||||||| |||
Sbjct 5450 ATCGGAGGATTCGGTAATTTCTTATTACCTTTATTAGTAGGTGGACCAGATATGGCGTTT 5391
Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713
||||| | || || ||||||||||||||||||
Sbjct 5390 CCAAGATTAAATAACATAAGTTTTTGATTACTA 5358
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732
|| || ||||| || |||||||| | |||||| || | |||||||| || || |||| |
Sbjct 4948 TCTGGGTGACCGAAGAATCAGAAAAGATGTTGGTATAATATAGGATCTCCACCTCCTGCT 5007
Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
|||||||| ||| |||||||||||||| ||||||||
Sbjct 5008 ACTTCAAAAAATGAAGTGTTAAAATTTCTATCTGTTAAAAC 5048
>seq111
Length=1775037
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | || | ||||| || | |||||| |||||||||||
Sbjct 733912 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 733853
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| || || ||||| || || || || |||||||| |||||||| ||| ||| |||
Sbjct 733852 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 733793
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | |||||| |||||||| || | || |||| |||
Sbjct 733792 ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 733734
>seq222
Length=22645
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/103 (80%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||||||||||||||||||||||||||| | ||||| || || || ||||
Sbjct 4908 TTCAGGGTGACCAAAAAATCAGAATAAATGTTGATATAAAATAGGGTCTCCACCACCTGC 4967
Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
||||| |||| | || ||||| ||||| || ||||| ||
Sbjct 4968 AACTTCAAAGAAAGAT-GTGTTAAAGTTTCTGTCTGTTAATAC 5009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192527303776970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |