Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq5553 170 2e-37 >seq5553 Length=468990 Score = 170 bits (188), Expect = 2e-37 Identities = 478/724 (66%), Gaps = 16/724 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| |||| ||| || || ||||| ||||| || ||||| | || || || |||||| Sbjct 199103 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCC 199044 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || | | | || ||| | | || Sbjct 199043 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCTAACAGTA 198986 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | ||| || || ||||| || ||||| |||| | | |||||| || | ||| | Sbjct 198985 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-C 198927 Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 | | |||||||| || ||||| || ||||| || || || || | || || Sbjct 198926 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 198867 Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 || || | ||| | ||| | | || ||||| |||| || || ||||| Sbjct 198866 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAAG 198807 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032 || || | ||||| || | | ||| || ||||| || ||||| | ||||| ||| Sbjct 198806 TCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATG 198747 Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092 || |||||||| | ||| || || || || || || ||||| ||||| |||||||| Sbjct 198746 AGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCA 198687 Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152 |||| ||||| || || | || |||| | |||| || |||| | ||||||| | Sbjct 198686 ACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGC 198627 Query 17153 TGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA---A 17208 | |||| || || || ||| ||||| || | || ||||| || || | | Sbjct 198626 AACGCCCAGTCAGCCTTCCTGCGG-ATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 198568 Query 17209 T-TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 | ||| || || | | ||| | || || ||||||||||| ||| || | |||| Sbjct 198567 TGTTCGCTGCTT----TGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 198512 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| |||||||| || |||| || || | Sbjct 198511 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCA 198452 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || | ||| || || | || || ||||| || ||||| ||| |||||||| | Sbjct 198451 CCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGA 198392 Query 17388 ACGC 17391 | || Sbjct 198391 ATGC 198388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517503044813040