Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq4879 100 2e-16 >seq4879 Length=2170 Score = 100 bits (110), Expect = 2e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964 ||||||| |||||||| | || ||| || |||| || |||||| ||||| | Sbjct 1178 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 1237 Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024 |||||||| || || | ||||||||| ||| | ||| | ||| | |||||||||| Sbjct 1238 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 1297 Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084 ||| | || ||||||| ||| || || | || | || |||||||||||||| Sbjct 1298 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 1357 Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144 |||| | ||| |||| || || ||| || | |||||| || ||| Sbjct 1358 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 1417 Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194 ||| ||||| | ||||| ||||||| ||| || |||||||| || || Sbjct 1418 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 1467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429971926655666