Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq310 435 3e-117 seq5553 185 8e-42 seq1041 111 1e-19 >seq310 Length=625919 Score = 435 bits (482), Expect = 3e-117 Identities = 1034/1547 (67%), Gaps = 40/1547 (3%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || || || |||||||| | ||| || || || |||||||||| |||| | | Sbjct 235673 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 235614 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || || |||| ||||| | |||||| || || ||||||||||| | Sbjct 235613 GCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAA 235554 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | || ||||||| | || || | |||||| | |||||||| Sbjct 235553 CGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCC 235494 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGC 22689 | || |||| || ||| ||| ||||||| ||||| || | | |||| |||| | Sbjct 235493 AGAGGTCGGTAGGAGTC---TTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACT- 235438 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 || |||| ||| || ||||| ||||| || | ||||| ||||| ||||| Sbjct 235437 -GGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTC 235379 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 | || | | ||| || ||||| || || | | || | || ||| ||||| Sbjct 235378 AAGAGCAGCATGATACATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGA 235319 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | ||||| || | || ||| || || || | ||| | || || | || Sbjct 235318 G----TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGAC 235263 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGA 22923 | || ||||||| | || | |||| |||||| || | || || | || Sbjct 235262 CAATGGGTCGGTGGCGGAAGTTG--CTCTTTCGTGCCTCTGGTACTGGGTAGTAGTTGAT 235205 Query 22924 ATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAA 22983 ||||| || |||||| ||| | || || | ||| || | | || Sbjct 235204 CTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAA 235145 Query 22984 GTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTG 23038 ||| |||| | |||| || | || | || | || | ||| || |||||| Sbjct 235144 GTCAAAAACCTCGTTCTCGAT-GT-CGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTG 235087 Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098 || || || ||||| ||| | | |||||| | || || || || | ||| | | Sbjct 235086 CAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTC 235027 Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158 || || ||||| | ||| |||| ||||| || || ||| | |||||||| || ||| Sbjct 235026 TTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATG 234967 Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218 | || ||||| |||||| ||||| ||||| || || ||| || ||||||| || Sbjct 234966 AAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGCACGA 234907 Query 23219 ACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGC 23277 || |||| |||| ||| ||||||| ||| || | ||||| | | | || ||| | Sbjct 234906 AC-CGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTC 234848 Query 23278 ACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337 ||||||| || | ||| || || ||| | || ||||| ||| |||| | || Sbjct 234847 ACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTT 234788 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 | ||| || || |||||| ||||| || ||||| ||||||||||||| ||||| || Sbjct 234787 CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC 234728 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 || || || || || || |||||| | |||| || | || ||||| ||||| Sbjct 234727 ACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATG 234668 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||||||||| ||||| | |||||| || || || | ||| ||||| ||||| || ||||| Sbjct 234667 CCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTA 234608 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 ||| || |||||||| || |||| |||||| || || ||||||||||| | |||| | Sbjct 234607 ACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGT 234548 Query 23578 GCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 | |||||| | || ||| | || | | ||||||||| || | ||| || || || Sbjct 234547 G-CCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAG 234489 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 | || || ||||| || ||| || || || |||||||| || || |||||||| | Sbjct 234488 CGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCAT 234429 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 | || | || |||||||| || || | | ||||| | || ||| | || ||| | Sbjct 234428 CCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAA 234369 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGTACGTGTCGATGGC 23814 |||| || || || || ||||| | || |||||| ||| ||||| || || || || Sbjct 234368 GTGTTGGCGAAGCATGTGTGAAGTACTTCA-ACGACATGTAG-TTGTATGTCTCAATCGC 234311 Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874 || |||||||| || || || || |||| || || ||||| ||||| | ||| ||||| Sbjct 234310 TGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCT 234251 Query 23875 CTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCC 23931 |||| ||| | ||||| |||| ||| || ||||| || | || || || || || Sbjct 234250 CTCGGCAACCTT---GCCGTCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCC 234194 Query 23932 AAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCA 23978 || || | ||||| ||||| || || | || |||||||| |||| Sbjct 234193 GAAGTACTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCA 234147 >seq5553 Length=468990 Score = 185 bits (204), Expect = 8e-42 Identities = 561/858 (65%), Gaps = 23/858 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| || || || || ||||| | || || | || ||| Sbjct 198259 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 198318 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || || || || || | Sbjct 198319 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 198378 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||||||||||||||| ||||| |||||||| | ||||| | Sbjct 198379 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 198438 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| | ||||||| ||||||| ||||| || || | || Sbjct 198439 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 198498 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || || | ||||| || ||||||||||| ||| | | || ||| | Sbjct 198499 GAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAG 198558 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | ||| | || |||||||| || ||||| | || || ||| || |||||| | Sbjct 198559 CAGCGAA-CATAC-CTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTG 198616 Query 57925 AGTGGTCAATCAAATGGATA----AAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 | ||| | | |||||| | ||| | | || |||||| | || || Sbjct 198617 ACTGGGCGTTGCGATGGATTTCTGACAAGAACT----CGACATTCGCCCTCCGTCTCATT 198672 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || |||||||| || ||||| ||||| || || ||||| || || || ||| || Sbjct 198673 GCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTG 198732 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 |||||||| || || ||| |||| || || || |||||| | || || || || ||| Sbjct 198733 AAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 198792 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || | || || || || || ||||| ||| ||| || | || || |||| | | Sbjct 198793 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCGAACCAG 198852 Query 58161 GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAA 58220 | | | | ||| ||||||||||| ||| ||||||| | ||||| | || || Sbjct 198853 GCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGAC 198912 Query 58221 GCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 || || || | || | || || |||||| || | |||||| | |||||||| | Sbjct 198913 GCTCTTCCATGCAAGC--TTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAAT 198970 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 | || ||||| | || || | | ||| | ||| || |||||| | | || Sbjct 198971 TCGTCGCCGATCGCCTACTGTTAGCACTCGGCAACAAGAAGTTC--TACAACGCCACCAA 199028 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaa 58396 || || || || ||| | || ||||| | |||||||| ||||| ||||| || Sbjct 199029 CCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCG 199088 Query 58397 aGTTAGCGAATATCAAAA 58414 ||| |||| || || || Sbjct 199089 TGTTGGCGAGTACCAGAA 199106 >seq1041 Length=763809 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || ||||| || ||||| |||| || ||| | ||| Sbjct 709203 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 709262 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || || || |||||||| ||| | || || ||||| Sbjct 709263 GACACGATCGACAACGTCAAGTCAAAG-ATCCAAGACAAGGAGGGCATCCCACCGGACCA 709321 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | || ||| ||| | ||||| || Sbjct 709322 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAA 709381 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || ||||| || |||| || Sbjct 709382 CATCCAGAAGGAGTCCACTCTGCACTTGGTGCT 709414 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || ||||| || |||||| |||| || || | | Sbjct 708975 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 709034 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| || | || || |||||| Sbjct 709035 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 709094 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || ||||| ||| | || || | ||| || || || ||| Sbjct 709095 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAAC 709154 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||||||||| || |||| ||| | || | || |||| Sbjct 709155 ATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGTA 709203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445729746857760