Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_003157.5 Length=43106 Score E Sequences producing significant alignments: (Bits) Value seq5018 116 1e-21 >seq5018 Length=776 Score = 116 bits (128), Expect = 1e-21 Identities = 214/314 (68%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 917 TACTGGGATTCTTTTGATGCAGGAATTTACGTAGACGTTGTGACAGGAGAACCACTTTTC 976 ||||||||| | | |||| | ||||| || || || || || ||||| || ||||| Sbjct 701 TACTGGGATACGTATGATCCGGGAATCTATGTGGATGTGAGCACCGGAGAGCCTCTTTTT 642 Query 977 TCTTCAAAAGACAAATTTGAATCAGGTTGTGGTTGGCCAAGCTTTAGCCGCCCCATCAGC 1036 | | || |||| ||| || |||||||| ||||||||||||| ||| || ||| Sbjct 641 GCCAGTGAGGATAAATATGATTCCGGTTGTGGCTGGCCAAGCTTTACCCGTCCAATCTTA 582 Query 1037 CCAGACGTTGTCCGCTACAAGGAAGATAAGAGTTTCAATATGACGAGAACAGAAGTGCGC 1096 |||| ||||| ||| ||||||| | |||||| | |||||||| || Sbjct 581 GCAGATGTTGTGACCTATCGAGAAGATACTTCCTATCATATGATCCGGACAGAAGTCCGG 522 Query 1097 AGCCGTTCAGGGAATTCTCATCTGGGGCATGTCTTTACTGACGGACCTAAAGACCAAGGC 1156 || || |||||| || ||| || || ||||| ||| || || || ||| || || Sbjct 521 AGTCGCTCAGGGGATATTCACCTTGGTCATGTTTTTGACGATGGGCCCGCAGATCACGGA 462 Query 1157 GGCCTTCGTTACTGCATCAATAGCTTGTCTATTACCTTTATTCCAAAAGCTGATATGGAA 1216 ||| ||||||||||| || ||| || ||| ||| ||||| || || ||| || Sbjct 461 GGCAAGCGTTACTGCATTAACAGCGCTTCGATTCACTTCATTCCTTTGGCGGAGATGCAA 402 Query 1217 GCTAAGGGCTATGG 1230 || || ||||| || Sbjct 401 GCAAAAGGCTACGG 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137806834550448