Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq5553 95.1 1e-14
>seq5553
Length=468990
Score = 95.1 bits (104), Expect = 1e-14
Identities = 347/539 (64%), Gaps = 7/539 (1%)
Strand=Plus/Minus
Query 13892 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951
||||||||| | || || ||||| || ||||| | || | ||| | || |||||
Sbjct 198795 GCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTT 198736
Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011
|| | ||| || || |||||||| || || || ||||| || |||||||| || |||||
Sbjct 198735 CTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAA 198676
Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071
|| || | || | || | | || |||| || |||||| ||||| ||
Sbjct 198675 TGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTC 198616
Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCT-CTT 14130
|| || | || | || | || || ||||| || | ||| || |||
Sbjct 198615 AGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTT 198556
Query 14131 TAGTACT-TGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCC 14189
| | | ||| |||||||||| || || | | ||| | || ||||| ||||| |||
Sbjct 198555 TGGCTCGCTGA--TGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCC 198498
Query 14190 ATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAAT 14249
|| ||||| || || || ||||||| || |||| || || || ||| ||
Sbjct 198497 ATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAG 198438
Query 14250 CTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTT 14309
| ||| | | || || || || || ||||| || || || ||||| | | || |
Sbjct 198437 CGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGT 198378
Query 14310 TTAATAAAGTATTGCTCTTCATTGTTGAGT---TTTTTCCAATCGGATAAATCCTTAGAA 14366
|| ||| || | || || | ||||||| || ||||| ||| | |||||| ||
Sbjct 198377 GAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGAC 198318
Query 14367 AGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425
||||| | || ||| ||||||| || || | || ||||| |||||| ||||||
Sbjct 198317 AGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 198259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479688554365200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |