Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_004166.2 Length=44010 Score E Sequences producing significant alignments: (Bits) Value seq165 118 3e-22 >seq165 Length=1109 Score = 118 bits (130), Expect = 3e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 37802 GTGGAACAGCGTCAGGACAAACGACCAATGCTATCGGACTTGCGGGAAAGTGGACAGCTA 37861 || || || |||||||| ||||| || ||| | |||||||||||| ||| | | Sbjct 455 GTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGGGAATCGGGATCGATC 396 Query 37862 GAGCAAGATGCAGACATCATCGAGTTTCTTTACAGGGATGACTATTATGATAAAGAGAGT 37921 ||||||||||| |||||| | | ||| || ||| |||||||||| ||| | | |||| Sbjct 395 GAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTACTATAACCAGGAGACC 336 Query 37922 GAAAGTAAAAACATTGTTGAGGTTATCATCGCGAAACACCGGGACGGCCCGGTAGGAACT 37981 || | ||||||||| | ||| |||| ||||| ||||| || | || |||||||| || Sbjct 335 GAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAATGGTCCGGTAGGTACG 276 Query 37982 GTGTCACTGG 37991 || ||||| Sbjct 275 GTAGAACTGG 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140699408582992