Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 89.7 5e-13
>seq1041
Length=763809
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | ||| ||||| || || | ||| || || || ||| ||||||
Sbjct 709184 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCCTC 709125
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || |||| || | | ||||| || || || ||||| || ||||| |
Sbjct 709124 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 709065
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975
|| || | |||||| | ||| ||||| || ||| ||||| || | ||||||||
Sbjct 709064 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 709007
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| || || |||||||||||
Sbjct 709006 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
|||| ||||||||||| ||| || ||||| || | ||| |||| | | ||||| |
Sbjct 709417 CGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAAT--CCGAAAGTGTCCGGC 709360
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||| ||||| || ||| | ||||| | | ||||| || || || || || || |
Sbjct 709359 CGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCT 709300
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || |||| ||||||| | ||| ||||| | || || || | ||||
Sbjct 709299 TGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGA 709240
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || || || || || || || || |||||
Sbjct 709239 TGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448254339256080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |