Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5876 113 7e-21
>seq5876
Length=784347
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || |||||||||||||||||
Sbjct 243290 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 243232
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 243231 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 243191
Score = 95.1 bits (104), Expect = 2e-15
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587
|||| | || |||| ||||||| ||||| ||| | |||| ||||||| || || ||
Sbjct 243133 CTCTCCAGTGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCAT 243074
Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647
|| ||||| || || ||||||||||| || || ||||||||||||||| | || |
Sbjct 243073 CCGCGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGT 243014
Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
||||| || | || || |||||||| | | || ||||| ||
Sbjct 243013 TGTCTACGCCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 242969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79069185688554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |