Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq310 309 8e-79
seq5553 89.7 1e-12
seq4947 89.7 1e-12
seq1019 87.8 5e-12
>seq310
Length=625919
Score = 309 bits (342), Expect = 8e-79
Identities = 1158/1795 (65%), Gaps = 52/1795 (3%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449
||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| ||
Sbjct 234191 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 234249
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| ||||| || ||| | |||||||| ||| | || || ||| | || |||| ||
Sbjct 234250 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 234309
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564
|||||||| ||||| || ||| || |||| ||| ||||| || || |||||
Sbjct 234310 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 234364
Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624
||| | | || |||||| || | | | ||| | | || ||||| | | |||
Sbjct 234365 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 234424
Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684
||||| || ||| || ||||||| || || || |||| ||||| | || ||||||
Sbjct 234425 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 234484
Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743
|| || ||||| |||||| | | ||||| | | || |||| | |||||| |
Sbjct 234485 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 234543
Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||||| || || || || || || || ||||| || || | | |||| |||||
Sbjct 234544 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 234603
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| ||||| ||||||||||| ||||| ||| || ||||| || || || |||||
Sbjct 234604 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 234663
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| || | | |||| | || || || || ||| ||||| || ||| |
Sbjct 234664 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 234723
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| || ||| ||||||| || || ||| || | || | |||||| |||| || ||
Sbjct 234724 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 234783
Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
||| | | |||| | || | ||||| ||||||| || ||||| || ||||| |
Sbjct 234784 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 234842
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|||||||| | | || ||||| ||||| || || |||| ||| |||
Sbjct 234843 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 234902
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| ||| || ||||| |||||| ||| || | || |||||| ||||| || ||||
Sbjct 234903 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 234962
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
| | || ||||||| || | |||||||||| ||| ||| || | ||||| || |
Sbjct 234963 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 235022
Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279
||| ||||| || | || || ||||| || || ||| | ||||| || ||| |
Sbjct 235023 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 235079
Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331
| || || || || || ||| | || || || | | || | || |||
Sbjct 235080 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 235137
Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391
||||||| | || | ||| | || || ||| | | || | || || |||||
Sbjct 235138 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 235197
Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450
||||| | || || || ||| | || || || ||| | | || | || || || |
Sbjct 235198 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 235256
Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510
| |||||||||||||| | || || ||||| | || || ||| ||| |||| |
Sbjct 235257 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 235316
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| |||||||| || | || |||| |||| ||||| || |||||| ||| ||
Sbjct 235317 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTC 235376
Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630
| ||||| || || | || | | || ||| || || || || |
Sbjct 235377 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 235436
Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690
| | |||||||| | |||||| || | ||| || || | | || |||
Sbjct 235437 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 235496
Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741
|||||| ||| || ||| | |||| |||| ||| |||||||| |
Sbjct 235497 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 235550
Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801
||||| ||||| ||||| || || || || | |||||| | || ||||||||||
Sbjct 235551 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 235607
Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861
|||| || | |||||||| |||| || || || || | | || || || | ||| |
Sbjct 235608 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 235667
Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921
| || | || | |||||||| |||||| || || ||| || | ||||||||
Sbjct 235668 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 235727
Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981
|| |||||||| | ||||| || | ||| ||| || ||||||| || || |
Sbjct 235728 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 235787
Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041
|| | | ||||| ||||| ||||| || | ||| | || | | ||||| || |
Sbjct 235788 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 235847
Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101
| || |||||||||||| ||| ||| || ||| | |||| ||||||||
Sbjct 235848 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 235907
Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| |||| |||||| ||| || ||||| |||||| ||||| ||
Sbjct 235908 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 235962
>seq5553
Length=468990
Score = 89.7 bits (98), Expect = 1e-12
Identities = 146/207 (71%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496
||||| || |||||| || |||||| |||| |||| ||||||| |||||
Sbjct 198610 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 198668
Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556
||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| ||
Sbjct 198669 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 198728
Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616
||| || ||||||| | ||| | || || || || || || ||| | || ||| ||
Sbjct 198729 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 198788
Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643
|||||| | || || || || || ||
Sbjct 198789 TGAGGGCATGCACACAGACTTCGCCTG 198815
>seq4947
Length=180377
Score = 89.7 bits (98), Expect = 1e-12
Identities = 191/281 (68%), Gaps = 6/281 (2%)
Strand=Plus/Minus
Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474
|||| || | || ||||| || || || || || || | ||||| || || || || |
Sbjct 114309 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 114250
Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532
|||| ||| || ||| || ||||| || || ||||| ||||||||||| ||||||||
Sbjct 114249 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 114192
Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591
|| || ||||||||| |||||| || || ||| || ||| || | ||
Sbjct 114191 AGCCGAATACAAAACCTGCCACGACGACTACATCGGCCAAGGAGTCGACCAACTAGCCGA 114132
Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651
| || || | || | ||||| ||||| | |||||| || || | ||||| ||||
Sbjct 114131 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 114073
Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692
|||| | | | |||||||| || ||||| || |||
Sbjct 114072 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 114032
>seq1019
Length=1508174
Score = 87.8 bits (96), Expect = 5e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930
|||||| | || | ||| || ||| ||| ||||| ||||| || |||| |||
Sbjct 573895 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 573836
Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990
||||||||||||| | | |||||| || || |||||||||| |||||||||||| ||
Sbjct 573835 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 573776
Query 65991 CATTGCAGAAAAGAAAAACTC 66011
||| || ||||| |||||
Sbjct 573775 CATGGCGTGGAAGAAGAACTC 573755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303243752543996
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