Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq310 309 8e-79 seq5553 89.7 1e-12 seq4947 89.7 1e-12 seq1019 87.8 5e-12 >seq310 Length=625919 Score = 309 bits (342), Expect = 8e-79 Identities = 1158/1795 (65%), Gaps = 52/1795 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| ||||| ||| ||||| |||| | || | || | ||| || Sbjct 234191 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATTGACGGCAAGGTTGCCGA 234249 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | ||||| || ||| | |||||||| ||| | || || ||| | || |||| || Sbjct 234250 GAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGC 234309 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT----GTA-TTCACGCACGCCACGCCA 363564 |||||||| ||||| || ||| || |||| ||| ||||| || || ||||| Sbjct 234310 AGCGATTGAGACATACAA----CTACATG-TCGTTGAAGTACTTCACACATGCTTCGCCA 234364 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | || |||||| || | | | ||| | | || ||||| | | ||| Sbjct 234365 ACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATG 234424 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||| || ||||||| || || || |||| ||||| | || |||||| Sbjct 234425 AAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAG 234484 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCG 363743 || || ||||| |||||| | | ||||| | | || |||| | |||||| | Sbjct 234485 AACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGG-CTCATACATTGG 234543 Query 363744 CGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||||| || || || || || || || ||||| || || | | |||| ||||| Sbjct 234544 CGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGC 234603 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | ||||| ||||||||||| ||||| ||| || ||||| || || || ||||| Sbjct 234604 TCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCC 234663 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| || | | |||| | || || || || ||| ||||| || ||| | Sbjct 234664 GTGGCATGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGT 234723 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| || ||| ||||||| || || ||| || | || | |||||| |||| || || Sbjct 234724 TCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGA 234783 Query 363984 GGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 ||| | | |||| | || | ||||| ||||||| || ||||| || ||||| | Sbjct 234784 -ACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTT 234842 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 |||||||| | | || ||||| ||||| || || |||| ||| ||| Sbjct 234843 ACGGTGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGA 234902 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | ||| || ||||| |||||| ||| || | || |||||| ||||| || |||| Sbjct 234903 CGGTTCGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACAC 234962 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | || ||||||| || | |||||||||| ||| ||| || | ||||| || | Sbjct 234963 CTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCA 235022 Query 364223 TTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 ||| ||||| || | || || ||||| || || ||| | ||||| || ||| | Sbjct 235023 -TCA--AGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCG 235079 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT--------AAAAGATGGTAC 364331 | || || || || || ||| | || || || | | || | || ||| Sbjct 235080 CTGTCTGCAATCTGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGT-- 235137 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 ||||||| | || | ||| | || || ||| | | || | || || ||||| Sbjct 235138 TTTTGACTTCAAGAAACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGAC 235197 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCC 364450 ||||| | || || || ||| | || || || ||| | | || | || || || | Sbjct 235198 CATCGAGATCAACTACTACCCAGTACCAGAGGCACGAAAGAGC-AACTTCCGCCACCGAC 235256 Query 364451 CGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTG 364510 | |||||||||||||| | || || ||||| | || || ||| ||| |||| | Sbjct 235257 CCATTGGTCTTGGTGTCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCG 235316 Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570 | |||||||| || | || |||| |||| ||||| || |||||| ||| || Sbjct 235317 ACTCGCCTGAGGCCAAGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTC 235376 Query 364571 TGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCC 364630 | ||||| || || | || | | || ||| || || || || | Sbjct 235377 TTGAGGCTTCATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTC 235436 Query 364631 CTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGA 364690 | | |||||||| | |||||| || | ||| || || | | || ||| Sbjct 235437 CAGTATCGCAGGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGG 235496 Query 364691 ACTGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTC---CC 364741 |||||| ||| || ||| | |||| |||| ||| |||||||| | Sbjct 235497 ACTGGG--CCGC-AC---TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTC 235550 Query 364742 TCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 ||||| ||||| ||||| || || || || | |||||| | || |||||||||| Sbjct 235551 TCGTT---GCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCT 235607 Query 364802 TCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAG 364861 |||| || | |||||||| |||| || || || || | | || || || | ||| | Sbjct 235608 TCGAGCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAGGTCG 235667 Query 364862 TTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGA 364921 | || | || | |||||||| |||||| || || ||| || | |||||||| Sbjct 235668 TCAACCCATGGCTTCTGAAGGATCTCGTCGACCGTGGCCTCTGGTCAGAGAACATGAAGA 235727 Query 364922 ACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGA 364981 || |||||||| | ||||| || | ||| ||| || ||||||| || || | Sbjct 235728 ACCGCATCATCGCTGACAATGGCTCCATTCAGCGCATCCCCAACATTCCAGACGACCTCA 235787 Query 364982 AGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCG 365041 || | | ||||| ||||| ||||| || | ||| | || | | ||||| || | Sbjct 235788 AGGCACTCTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTGCAGATGGCTGCTG 235847 Query 365042 ATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCT 365101 | || |||||||||||| ||| ||| || ||| | |||| |||||||| Sbjct 235848 ACCGTGGTGCTTTTATCGACCAGTCTCAGAGCTTGAACATCCATATGAAGGAGCCAACCA 235907 Query 365102 CCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| |||| |||||| ||| || ||||| |||||| ||||| || Sbjct 235908 TGGGCAAGATTACCAGCATGCACTTCGCTGGTTGGAAGCTCGGTCTCAAGACTGG 235962 >seq5553 Length=468990 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Plus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGCGGAACGTCT 22496 ||||| || |||||| || |||||| |||| |||| ||||||| ||||| Sbjct 198610 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAA-GAACTCGACATTCGCCCTCCGTCT 198668 Query 22497 TATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTG 22556 ||||||||||| | ||||| || || ||||| |||||| | ||| ||| ||||| || Sbjct 198669 CATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTG 198728 Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616 ||| || ||||||| | ||| | || || || || || || ||| | || ||| || Sbjct 198729 GCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGA 198788 Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||| | || || || || || || Sbjct 198789 TGAGGGCATGCACACAGACTTCGCCTG 198815 >seq4947 Length=180377 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 111415 AAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTG 111474 |||| || | || ||||| || || || || || || | ||||| || || || || | Sbjct 114309 AAAACGTCCACATCTGGGACGGCAACGGTTCGCGAGAGTACCTAGACTCCGTAGGCCTAG 114250 Query 111475 TCGACAACGA--AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGG 111532 |||| ||| || ||| || ||||| || || ||||| ||||||||||| |||||||| Sbjct 114249 --GACACCGAGAAGTAGGCGACCTCGGCCCCGTCTACGGGTTTCAATGGCGGCACTTTGG 114192 Query 111533 TGCAGACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGA 111591 || || ||||||||| |||||| || || ||| || ||| || | || Sbjct 114191 AGCCGAATACAAAACCTGCCACGACGACTACATCGGCCAAGGAGTCGACCAACTAGCCGA 114132 Query 111592 ATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGA 111651 | || || | || | ||||| ||||| | |||||| || || | ||||| |||| Sbjct 114131 A-GTAATCCACAAACTCAAGAATAACCCTTATGATCGTCGGATAATATTAAGTGCCTGGA 114073 Query 111652 ACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCAT 111692 |||| | | | |||||||| || ||||| || ||| Sbjct 114072 ACCCCGCAGACCTTAAGAAAATGGCCCTCCCACCCTGCCAT 114032 >seq1019 Length=1508174 Score = 87.8 bits (96), Expect = 5e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||| | || | ||| || ||| ||| ||||| ||||| || |||| ||| Sbjct 573895 GTTACGCACAGTGCTGTCGTACTTGATCATGACTTCTTCCAAAGCCTTCACTAGACGACG 573836 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||||||||||||| | | |||||| || || |||||||||| |||||||||||| || Sbjct 573835 CTGGATGTAACCAGTCTCTGCAGTCTTGACAGCGGTATCAATGAGACCTTCACGACCACC 573776 Query 65991 CATTGCAGAAAAGAAAAACTC 66011 ||| || ||||| ||||| Sbjct 573775 CATGGCGTGGAAGAAGAACTC 573755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303243752543996