Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 131 1e-25
seq5876 93.3 4e-14
seq1051 89.7 4e-13
>seq1041
Length=763809
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || || |||| || ||||||||| | ||
Sbjct 709203 ATGCAAATTTTCGTCAAGACACTCACCGGCAAGACCATCACACTCGAAGTGGAATCATCC 709262
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||| || |||||||||||||| || ||||| || ||
Sbjct 709263 GACACGATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGCATCCCACCGGACCAG 709322
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | ||||| ||| || | || |||||||||
Sbjct 709323 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACACTTTCGGATTACAAC 709382
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || ||||| | || || || |||| | || |||||
Sbjct 709383 ATCCAGAAGGAGTCCACTCTGCACTTGGTGCTGCGTCTCCGTGGAGG 709429
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | ||||| || || |||| || || || || ||| |
Sbjct 708975 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 709034
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || |||||||||||||| ||||| || ||
Sbjct 709035 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAG 709094
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| ||||| ||| | |||||| || || | || || ||||||
Sbjct 709095 CAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACTACAAC 709154
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || |||||||| ||
Sbjct 709155 ATCCAGAAAGAATCGAC 709171
>seq5876
Length=784347
Score = 93.3 bits (102), Expect = 4e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||| |||||||| || || || || | || || |||||||| ||| | ||
Sbjct 203301 AGACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGA 203360
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
|||| ||||||| ||||||| ||||||||||| || ||
Sbjct 203361 GGATGGCCGCACCCTCTCCGACTACAACATTCAGAAGGA 203399
>seq1051
Length=501590
Score = 89.7 bits (98), Expect = 4e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || || || | | ||| ||| | ||| || ||||
Sbjct 97204 ACTGGCAAGACCATCACGCTCGAGGTCGAGTCGAGCGACACCATCGACAATGTCAAGAGC 97145
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || ||||| || || || ||| | || || || || ||
Sbjct 97144 AAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAGCGTTTGATCTTCGCTGGAAAG 97085
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||||| |||||| |||||| ||||||| |||||||| || ||
Sbjct 97084 CAGTTGGAGGATGGTCGCACCCTCTCCGACTACAACATCCAGAA 97041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419694350668570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |