Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 134 3e-26
seq1051 123 6e-23
seq5553 87.8 4e-12
>seq1041
Length=763809
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | || |||||| ||||| || ||||| |
Sbjct 709201 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGAC 709142
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || || ||||| || ||||| ||||| || | ||||
Sbjct 709141 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 709082
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || || || || || | ||||| || || ||
Sbjct 709081 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 709022
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 709021 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975
Score = 111 bits (122), Expect = 4e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || || || ||||| || | || || || ||||||
Sbjct 709393 TCCTTCTGGATGTTGTAATCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAG 709334
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| || |||||| || || || || ||||| || | || |||||
Sbjct 709333 ATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 709274
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||||| |||||||| ||||| ||||| ||||| || |||||||||
Sbjct 709273 TCGATCGTGTCGGATGATTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACG 709214
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 709213 AAAATTTGCAT 709203
Score = 109 bits (120), Expect = 1e-18
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||||| || || || || || |||||||
Sbjct 708973 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGAC 708914
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || |||||||| |||| || || || | |||
Sbjct 708913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 708854
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| ||||| ||||||||||| || ||| ||||| || || || | ||| ||| || ||
Sbjct 708853 ATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACTCAAC 708795
Query 288426 TTCGAGCGTGATCGTCTTCCCGGT 288449
||||| || || ||||| |||||
Sbjct 708794 CTCGAGGGTAATGGTCTTGCCGGT 708771
>seq1051
Length=501590
Score = 123 bits (136), Expect = 6e-23
Identities = 137/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| ||||| || || || || || ||||| |||||||||
Sbjct 97041 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 97100
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| |||||| || ||||||||| || || |||||||| || ||| || || || ||
Sbjct 97101 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT-GCTCTTGACATTGTC 97159
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||||||||| ||||| || || || | ||| |||||
Sbjct 97160 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGCCTTTACGAA 97219
>seq5553
Length=468990
Score = 87.8 bits (96), Expect = 4e-12
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214
|| ||||| || | |||||| ||||| || |||||||| || ||||| | |
Sbjct 198934 GGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTA 198993
Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274
|||||||| | |||| | ||||| | | || ||||||| ||| ||||| |||
Sbjct 198994 GCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATT 199053
Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGT 269334
||||| | || ||||| ||||||||||| |||||||| |||| || || |||||
Sbjct 199054 TCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAGAAGGCTGGT 199113
Query 269335 GTAATG 269340
|| |||
Sbjct 199114 GTCATG 199119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179554977989884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |