Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5553 138 1e-27
>seq5553
Length=468990
Score = 138 bits (152), Expect = 1e-27
Identities = 525/817 (64%), Gaps = 23/817 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || ||||| ||||||||||||||||| ||||| ||| ||| || ||||||||
Sbjct 199101 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCAT 199042
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 125872
|| || || ||||| | | ||| | | |||||| || | | ||
Sbjct 199041 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTG-----CCGAGTGCTAACAGT 198987
Query 125873 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 125932
|| ||||| | |||| | |||||||| | ||||| ||| |||||| || | ||
Sbjct 198986 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 198927
Query 125933 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG 125992
|| ||||| || ||||| | |||| ||| ||| || ||||| || | ||||
Sbjct 198926 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 198867
Query 125993 GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052
|| | | || || | || || | | ||| || ||| ||
Sbjct 198866 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAAG 198807
Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112
||| ||| | ||||| |||||||||||||| || |||||||| || || | ||||
Sbjct 198806 TCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATG 198747
Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172
||||| || ||||||| |||||| || ||| ||| || || ||||||||||| |||||
Sbjct 198746 AGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTCA 198687
Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCAC 126229
|| || || |||| |||||| || || | ||| || |||| || |||
Sbjct 198686 ACGGCGGCAAATGCAATGAGACGGAGGGCGAATG---TCGAGTTCTTGTCAGAAATCCAT 198630
Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGAG 126288
|| |||||| | ||||| | ||| || |||| | | | ||| || || || |
Sbjct 198629 CGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGG 198570
Query 126289 TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCC 126348
| ||| | || ||| || ||||||| |||| ||||| |||||||| |||
Sbjct 198569 TATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGA 198511
Query 126349 GTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 126407
||||| | | ||| || | ||| | ||||||| | || || || ||||| |
Sbjct 198510 GTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCA 198452
Query 126408 CCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 126467
||||| | || | || ||||| ||||| |||||||| | || || |
Sbjct 198451 CCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGA 198392
Query 126468 ACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGT 126524
| || |||| | ||||| |||| | ||||| | | | ||||||||||
Sbjct 198391 ATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGT 198332
Query 126525 CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
||||||||||| ||||| | |||||| || |||||
Sbjct 198331 GGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 198295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597304482600240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |