Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq310 257 2e-63
>seq310
Length=625919
Score = 257 bits (284), Expect = 2e-63
Identities = 618/923 (67%), Gaps = 14/923 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||||||||| || ||||| |||| || || |||
Sbjct 234179 AACTACCAGTACTTCGGCTTCAAGACTCTGGAGCGATCATACCTTCTCAGAATTGACGGC 234238
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| ||||| ||||||| ||| || | ||||| || || |||| ||||| || |
Sbjct 234239 AAGGTTGCCGAGAGACCGCAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAA 234298
Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892
||||| | | | ||| | | | || ||||| | ||| | || ||||
Sbjct 234299 GACATTGAAGCAGCGATTGAGA-CATACAACTACATGTCGTTGAAGTACTTCACACATG- 234356
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
| | || || || |||| || || ||||| | | ||| | | || || ||| ||
Sbjct 234357 CTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGG 234416
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
|| | | |||| ||| ||| || || | ||| | ||||||| ||||| | |
Sbjct 234417 TGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTCAAGATATGTGCCATGA 234476
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || |||| || || || || | ||| ||| || | | |||| || || |
Sbjct 234477 TCTCCAAGAACGCTGGCGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCAT 234536
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| |||| || || ||||| |||||||| || || || ||||| || |||| ||||
Sbjct 234537 ACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACA 234596
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || || ||||| ||||||||||| | | | ||| |||| || |||| |
Sbjct 234597 ACACTGCTCGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACC 234656
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGC-TTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
| ||||| ||||| || ||||| || || ||||| ||||| || |||||||| || ||
Sbjct 234657 TTGAGCCGTGGCATGCAGACGT-CATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAG 234715
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | || | || | ||||||||||||||| | || || || |||||| |
Sbjct 234716 GAAGAAGTTCGTGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAG 234775
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| ||||| | ||| | | |||| ||| | || ||||| ||||| || || |||||
Sbjct 234776 CGTGTCGAACAGAACGGCACTTGGACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCG 234835
Query 94372 GACGTTTGTGGATCGCGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
|| |||| || | || || || || |||| | ||||| || | |||||||
Sbjct 234836 GATGTTTACGG-TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGG 234894
Query 94431 CAG---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
| | || |||| |||| ||| | ||| || || | || | ||| ||
Sbjct 234895 CCGTGAGACGGTT---CGTGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGA 234951
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
||| || || || | ||| ||| ||||||| | | |||| |||| ||| ||| || |
Sbjct 234952 GACCGGCACACCTTTCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAA 235011
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
|| || ||||||||||| ||| ||||||| ||||| | ||||| || |||| ||
Sbjct 235012 TCTTGGCACCATCAAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGA 235071
Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630
||| | ||||| || || ||||
Sbjct 235072 TGAGGTCGCTGTCTGCAATCTGG 235094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494682521384880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |