Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 100 3e-16
>seq1041
Length=763809
Score = 100 bits (110), Expect = 3e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| ||||| | || ||| | ||||| || || ||||| ||||| || ||||| |
Sbjct 709429 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC--G 709372
Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
| || | | || || | || || || ||| | || | || ||||||||||| |
Sbjct 709371 AAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 709312
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
| ||||| || || ||||| || ||| |||| || | || | |||||||| || ||
Sbjct 709311 GGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCC 709253
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || | || |||||||| || || || || |||||||||||
Sbjct 709252 ACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
|| || |||||| | ||||| ||||||||||| || ||||||||||| ||||| || ||
Sbjct 708892 TGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGGATC 708833
Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314
|| || | || | ||||||||| ||||| || ||||| |||| || ||||||
Sbjct 708832 TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCG 708773
Query 45315 GT 45316
||
Sbjct 708772 GT 708771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451966034036880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |