Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5553 132 6e-26
>seq5553
Length=468990
Score = 132 bits (146), Expect = 6e-26
Identities = 347/521 (67%), Gaps = 9/521 (2%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
|| || ||| ||| | ||||| |||||||||||||| || |||||||| || ||
Sbjct 198812 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 198753
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
| ||||||||| || ||||||| |||||| || ||| ||| || ||||||||||||||
Sbjct 198752 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 198693
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698
||||| || || || |||| ||||| ||| || | || | |||| | ||
Sbjct 198692 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAAT 198634
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCAA 127757
||| || |||||| | ||||| | ||| ||||||| | | | ||| || || ||
Sbjct 198633 CCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAA 198574
Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817
|| ||| | || ||| || ||||||| |||| ||||| |||||||| |
Sbjct 198573 CAGGTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCT 198515
Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876
|| ||||| | | ||| || | ||| | ||||||| | || || || |||
Sbjct 198514 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATC 198456
Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
|| |||||| | || | || ||||| ||||| |||||||| | ||
Sbjct 198455 TGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCG 198396
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993
|| || || |||| | ||||| |||| | ||||| | | | ||||||
Sbjct 198395 AAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAG 198336
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| ||||||||| || ||||| | |||||| || |||||
Sbjct 198335 TCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 198295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613456754370480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |