Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 136 9e-27
seq1051 98.7 2e-15
seq5876 87.8 4e-12
>seq1041
Length=763809
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || | ||| ||||| |||||||| |||| |||||| || | | |||
Sbjct 709423 CGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGTGTC 709364
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 709363 CGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCC 709304
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || |||||| ||| ||| |||| ||||| | || ||| || || |
Sbjct 709303 TCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGT 709244
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || ||||| || || || ||||||||
Sbjct 709243 GTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTG 709206
Score = 107 bits (118), Expect = 5e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | |||||||||||| || || |||| ||||||||| | || ||| | |||||
Sbjct 709186 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCC 709127
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || || || || ||||||||||| || || || || |||
Sbjct 709126 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 709067
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 709066 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 709007
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || || || ||
Sbjct 709006 TTGCCGGTGAGAGTCTTGACGAAGATCTG 708978
>seq1051
Length=501590
Score = 98.7 bits (108), Expect = 2e-15
Identities = 125/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 199437 ACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGA 199496
|| |||| |||| ||||||||| | | || | ||||| |||| ||||||||| ||||
Sbjct 97036 ACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 97095
Query 199497 AGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGG 199556
|||| | ||||||||||||||| ||||| || ||||| ||||| ||| ||
Sbjct 97096 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 97155
Query 199557 ATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAG 199608
|||| |||||| | | || || || | |||||| ||||| || |||||
Sbjct 97156 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAG 97207
>seq5876
Length=784347
Score = 87.8 bits (96), Expect = 4e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || |||||| || | ||||||||| | | || | |||||
Sbjct 203420 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 203361
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530
|| |||||||| ||||||||||| | |||||||||||||| |||||| ||
Sbjct 203360 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTC 203308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178822239750726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |