Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 145 9e-30
seq1051 123 3e-23
seq5876 107 2e-18
>seq1041
Length=763809
Score = 145 bits (160), Expect = 9e-30
Identities = 174/234 (74%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| |||||| | | ||||| ||||| |||| || |||||| ||||| |||||
Sbjct 709435 TATTGGCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAA 709376
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
|| || || || || |||| || ||||||||||||||||| || | |||||||||||
Sbjct 709375 TCCGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCC 709316
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | || ||||||||| |||||| ||||| ||| | | | ||||||| ||
Sbjct 709315 GGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGA 709257
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| || | |||||||| ||||| || || || || || || ||||||||
Sbjct 709256 TTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Score = 129 bits (142), Expect = 7e-25
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
|| || ||||| |||||||| || ||||| || | || |||||||||||||| || ||
Sbjct 709165 TCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAA 709106
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||||||| | || | | |||||||||| ||||||| ||||| |
Sbjct 709105 ATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTG 709046
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||||| || || || || | |||||||| ||||| || || || || ||
Sbjct 709045 TCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACG 708986
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 708985 AAGATCTGCAT 708975
Score = 118 bits (130), Expect = 1e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| | || |||||||| || || ||||||||||| || ||||| |||| |||
Sbjct 708955 ACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 708896
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||||||| |||||||| | || | || ||||| ||| |
Sbjct 708895 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 708836
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | | |||||| ||| || || || | || ||||| |||
Sbjct 708835 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 708776
Query 46565 CCCGT 46569
|| ||
Sbjct 708775 CCGGT 708771
>seq1051
Length=501590
Score = 123 bits (136), Expect = 3e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || ||||| | || || | |||||| || ||||| |
Sbjct 97039 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 97098
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||| | || | | |||||||||| |||||| |||||| |
Sbjct 97099 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 97158
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||||||||| || || || | ||||||||| ||||| || || | || || |
Sbjct 97159 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGCCTTTACGA 97218
Query 46584 AGATTTGC 46591
|| | |||
Sbjct 97219 AGCTGTGC 97226
>seq5876
Length=784347
Score = 107 bits (118), Expect = 2e-18
Identities = 86/104 (83%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| || || ||||||||||| || ||||| | || |||||||||||||||
Sbjct 203405 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 203346
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
||||| ||||||||||||||||| | || | | |||||||||
Sbjct 203345 GCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 203302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565191923272560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |