Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq310 273 3e-68 seq2822 113 6e-20 seq5553 111 2e-19 seq5907 84.2 3e-11 >seq310 Length=625919 Score = 273 bits (302), Expect = 3e-68 Identities = 906/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Plus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || |||| || ||||||||||| ||||| | | | |||||| Sbjct 234263 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 234322 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 ||| || | ||||| | ||| |||| || || | ||||| || |||| ||||| Sbjct 234323 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 234381 Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796 ||| ||| || | | | | ||| || ||| | | || | ||||| || || Sbjct 234382 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 234438 Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856 |||| || |||| || |||| ||||||| ||||| ||| ||||| ||||| Sbjct 234439 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 234498 Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914 || | || | || | |||| |||| || ||| || || | || ||||| || Sbjct 234499 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 234556 Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974 ||| | ||| || | |||||||| || || | |||| ||| || || || || || Sbjct 234557 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 234616 Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028 || | ||| ||||| || | | || | || |||| |||||||| ||||| || Sbjct 234617 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCATGCA 234673 Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 234674 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 234732 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 234733 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234792 Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 || |||| |||| | || || || || || || ||||| || |||| ||||| | Sbjct 234793 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234851 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 |||| | | || ||| || ||| |||| | || || |||||| | | Sbjct 234852 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234911 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || | | ||| | ||||||||| || | || |||||||| || ||||| | || | Sbjct 234912 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234971 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 234972 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 235031 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 | || | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 235032 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 235091 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 235092 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 235151 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 |||| ||||| || || ||| |||||| ||||| |||| || || | || | Sbjct 235152 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 235211 Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 235212 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 235270 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684 ||| | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 235271 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 235329 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||||| | ||| | || |||||||| |||||||| || ||||||||||| | Sbjct 235330 CAAGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTCTTGAGGCTTCATG 235389 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 ||| | || ||| ||||| || || || | || ||||||| || || || Sbjct 235390 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 235449 Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | ||| || | || ||||||| ||| | ||| | || || ||||||| ||| Sbjct 235450 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 235506 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 ||||||| ||| || | ||| | || ||| ||| | | || || ||||| Sbjct 235507 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 235566 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | || Sbjct 235567 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 235626 Query 112982 CATCTA 112987 ||| || Sbjct 235627 CATTTA 235632 >seq2822 Length=903299 Score = 113 bits (124), Expect = 6e-20 Identities = 225/325 (69%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 323017 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 322958 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 176849 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 322957 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 322899 Query 176850 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTA 176908 | || |||| ||| ||| || | ||| || || ||||| || ||||| | Sbjct 322898 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 322841 Query 176909 CACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCA 176968 ||| || ||||| ||||||||||| | | || | || |||| | || ||| Sbjct 322840 ATCTTACCCCGAAGTGGGAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCA 322781 Query 176969 ACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGT 177028 | || ||| ||||| ||||| ||||||| ||||||||| |||||| || || Sbjct 322780 AGAGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGTGTGCACTTG--TGACCGT 322723 Query 177029 GC--CGTACCCGCCTTGTTCGCATC 177051 | |||||| |||||||| || || Sbjct 322722 CCTTCGTACCGGCCTTGTTGGCGTC 322698 >seq5553 Length=468990 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 198664 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 198722 Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 198723 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 198782 Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| | ||| ||| || || Sbjct 198783 CCGTGATGAGGGCATGCACACAGACTTCGC 198812 >seq5907 Length=3914 Score = 84.2 bits (92), Expect = 3e-11 Identities = 238/366 (65%), Gaps = 0/366 (0%) Strand=Plus/Plus Query 15884 ACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGC 15943 ||| ||||| || ||||| || || | || || || || || | || ||||| || Sbjct 28 ACGGTCAAAACGTCCTGGACGCAGCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGC 87 Query 15944 GGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTT 16003 || | || | ||||||| | | | ||||||||||| || | | |||||| Sbjct 88 TGCAACGATGATAATACCTTCATTGGCTCCGAAACCATCCATTTCAACGAGCAACTGGTT 147 Query 16004 AATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCAC 16063 | |||||||| ||||| || | | | |||||||| || || ||| || Sbjct 148 GAGTGTTTGTTCACGTTCGTCGTGACCACCACCAAGACCAGCACCACGCTGACGTCCTAC 207 Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 |||||||| ||||| || |||| ||| ||||| |||| || |||||| | Sbjct 208 CGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAACAA 267 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACA 16183 || |||||||| || || ||||| |||||||| || || |||| | ||||| Sbjct 268 GTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCGGAAAT 327 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 || ||| || ||| | ||||| |||| || || ||||| | || ||||| || Sbjct 328 GCTGAAGAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACCTGT 387 Query 16244 ACCTGG 16249 ||| || Sbjct 388 ACCCGG 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620691359456160