Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq310 150 2e-31 >seq310 Length=625919 Score = 150 bits (166), Expect = 2e-31 Identities = 1078/1718 (63%), Gaps = 55/1718 (3%) Strand=Plus/Minus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565 ||||||||| ||||| || |||||| ||||| ||||| | ||||| ||| || | Sbjct 235876 CTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCT---G 235820 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 ||| || |||||||| |||||||| | ||||| || || ||||||| |||| Sbjct 235819 GCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCG 235760 Query 109626 TTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682 ||||| |||||| |||| | | || | | |||||| | | |||||||| || Sbjct 235759 CTGAATGGAGCCATTGTCAGCGATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCC 235703 Query 109683 GACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740 | |||||| | | ||| ||| |||||| || || || ||||| | Sbjct 235702 ACGGTCGACGAGATCCTTCAGAAGCCATGG--GTTGACGACCTGGAACTCGCCAGCCAAC 235645 Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800 || || ||| ||||| | ||||| || ||||| ||||| || ||| | ||| Sbjct 235644 ACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATC 235585 Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC--G 109858 || | || || ||||| ||||| || || | |||||| ||| || | ||| | | | Sbjct 235584 TGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGG 235525 Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918 | | | || | | | |||| |||| || | | | || ||||| || Sbjct 235524 GCGAT-CTTGCCCTTG-AGTGCGGCCCAGTCCCAGAGGTCGGTAGG---AGTCTTGCC-- 235472 Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978 |||||| || || || | |||| | | ||||| || | | ||||||| | Sbjct 235471 -CCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAG 235413 Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038 || ||| || | |||| |||||||||| || || ||||||||||| ||||||| Sbjct 235412 GACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATACATGGTCTCAA 235353 Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGA 110094 |||| || ||| | | ||| ||||||| || | || | |||| Sbjct 235352 AAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGA 235293 Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154 | |||| || ||||| | ||||| ||||||||||| || || | ||| Sbjct 235292 AGG----CATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTC 235237 Query 110155 CGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214 ||| || | ||| ||||| ||||| |||||| | || || || || Sbjct 235236 TTTCGTGCCTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTG 235177 Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274 || || |||| || || ||||| | | | || || | |||| | | ||| Sbjct 235176 ACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACG 235117 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || |||| ||||||| || || |||||||| |||| ||| ||| | | ||| Sbjct 235116 TAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTAC 235057 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 |||| || || || ||||| || || ||||| ||| || | ||||||||||| Sbjct 235056 TCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTC 234997 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 ||| |||| || ||||| || || ||| | || || || || || ||||| | || | Sbjct 234996 TTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCG 234937 Query 110455 AGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCG 110514 ||||| || | ||||| | || | || || | | ||||| ||| Sbjct 234936 AGAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCA 234877 Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT- 110573 || ||||| |||| || || | ||||| ||||| || ||| || || || Sbjct 234876 TAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGA-CCAGGGCATTC 234818 Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633 || ||| || | || | |||| | || || || || | || ||| || || || || Sbjct 234817 GTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 234758 Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693 |||||| | || |||| | || || |||| | ||||| | || ||||| ||| Sbjct 234757 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 234698 Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746 || |||| || | ||||| || | ||||| || || || |||| || | Sbjct 234697 AAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC 234638 Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 |||| | ||| | | || |||||| ||| || || || ||| || |||| | | Sbjct 234637 TGGA-CGCTT--GTTG-CCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTA 234582 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865 |||| || | || || | |||| || ||||| || | ||| | || | | |||| Sbjct 234581 GCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCT-GTGGCC 234523 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 | |||| ||| | ||| | ||||||||| || || ||| || ||||| || Sbjct 234522 CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATC 234463 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| ||| | || ||||||||||| || |||| |||| | | ||||| || Sbjct 234462 T-TGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGA 234404 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 | | ||| | | || || || ||| |||| ||||| || | ||||| ||| || Sbjct 234403 TGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGA--AG 234346 Query 111045 ACCTT--GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102 ||| ||||| | ||||||||| || | || | | |||| || ||||| Sbjct 234345 TACTTCAACGACATGTAGTTGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATG 234286 Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162 || | || || ||||||| ||| | ||| || | ||| | ||| || |||| | Sbjct 234285 CCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTG 234226 Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 ||||||| ||| || ||||||| || ||||| Sbjct 234225 AGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTA 234188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588927571448400