Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq310 194 2e-44 seq5553 91.5 2e-13 >seq310 Length=625919 Score = 194 bits (214), Expect = 2e-44 Identities = 890/1394 (64%), Gaps = 31/1394 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || ||| |||| ||| || | ||| ||| Sbjct 235632 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 235573 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| || || | | ||| ||| || | ||| | | ||| || Sbjct 235572 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 235513 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| || || | ||| | ||| ||||||| || | || Sbjct 235512 TTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGG 235456 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AG 106169 ||| | || || || ||||| || ||||||| || | ||| | ||||| || Sbjct 235455 AGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCAG 235398 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | | || || ||||| || | || ||||||||||| ||||| || | ||| | Sbjct 235397 CAAGCTCGCATGAAGCCTCAAGAGCAGCATGATACATGGTCTCAAAAATCTGGATATTAA 235338 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 ||||||||| ||| || || |||| |||| | || |||| || |||| Sbjct 235337 GCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGAC 235278 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 106348 | | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 235277 CGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACT 235219 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || || | || | || ||| ||| || || || || | || |||| || Sbjct 235218 GGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCG 235159 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 235158 TGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGC 235099 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || |||| |||||| ||||| |||||| | | | |||||| | || || || ||| Sbjct 235098 GAAGCCAGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCAC 235039 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 || || || ||||| || || || | |||||| || || ||||| |||| || ||| Sbjct 235038 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCC 234979 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| || ||| | || || || ||||| ||||| | || |||||| || | ||| | Sbjct 234978 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 234919 Query 106649 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGC 106707 | || | || | | ||||| | ||| | | ||| || ||| || | Sbjct 234918 TTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTC 234860 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 106766 | ||||| ||||| | || || ||||| || || || || || || | |||| Sbjct 234859 CTTGAACTCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAG 234801 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| || || || || |||| ||| || || || |||||||| || | | | Sbjct 234800 TCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGA 234741 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | ||| | ||| | ||||| | || ||||| || | || | ||||| || Sbjct 234740 ACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCA 234681 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 ||| || || ||||| |||||||| |||| || | || || | ||||| | Sbjct 234680 TGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTGC 234624 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || || || ||| |||| | || || |||||||| | || ||| | Sbjct 234623 CACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGT 234564 Query 107001 CTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 ||| || ||||| || | ||| | ||| | |||| || | | || | || Sbjct 234563 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATG 234506 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | |||||||| ||||| ||| ||||| ||||| | | || || | ||||| Sbjct 234505 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGAT 234446 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||| | || ||| ||||| |||| | | |||||| | | ||||| ||| Sbjct 234445 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 234386 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGT 107237 ||||||||| |||| || ||||| | || || |||| ||| | ||||| | || Sbjct 234385 GGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGT 234327 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | | | |||||||||||||| || ||||||| ||||||||||| | Sbjct 234326 TGTATGTCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGA 234267 Query 107298 ACATGTATTGGGGT 107311 ||| | ||| ||| Sbjct 234266 TCATCTGTTGCGGT 234253 >seq5553 Length=468990 Score = 91.5 bits (100), Expect = 2e-13 Identities = 325/501 (65%), Gaps = 18/501 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | || |||||| ||||| Sbjct 199100 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 199041 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || || | ||||| | | | | || || | | | || | Sbjct 199040 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTG-----CCGAGTGCTAACAGTA 198986 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 | ||||| | || | |||||||| | ||||| ||| |||||| || | || | Sbjct 198985 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGCT 198926 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 | ||||| || ||||| | |||| | | ||| ||| || ||||| | | |||| Sbjct 198925 TGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATGC 198866 Query 117221 CGTGGATAGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 117278 || | | | ||| | || | || || | | ||| || ||| || Sbjct 198865 TCTGCACAAGGGCCTGGT--TCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 198808 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || ||| | |||||||| ||||| || || || || ||||| || || | ||| Sbjct 198807 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 198748 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCT 117397 |||||| || ||||||| ||| | ||||| ||| || || || |||||||||||||||| Sbjct 198747 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAA-GATCCAGAGAAGAAGATACCCT 198689 Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCAT 117456 | || ||||| |||| || || |||||| | |||| |||| ||| |||| Sbjct 198688 CAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCAT 198630 Query 117457 TTCATTGCCCATTTCGCCTTC 117477 || ||||| | |||||| Sbjct 198629 CGCAACGCCCAGTCAGCCTTC 198609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589932288828720