Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq875 104 8e-18 >seq875 Length=1550 Score = 104 bits (114), Expect = 8e-18 Identities = 219/327 (67%), Gaps = 0/327 (0%) Strand=Plus/Minus Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270 ||| ||| |||||| | | | || | |||| |||||| || || | | |||| | Sbjct 1412 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 1353 Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330 || | ||| || | || ||||| || ||||| | || || ||||| ||||| Sbjct 1352 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 1293 Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390 || | ||| ||||| ||||| || | | ||| ||||| || || || | || Sbjct 1292 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 1233 Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450 ||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| || Sbjct 1232 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 1173 Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510 |||| ||| || | | ||||||| || ||||||||||| |||| ||| || Sbjct 1172 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 1113 Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537 || || || || || || || |||| Sbjct 1112 GCCGCGCGGAGGCATCTCCATCGACCC 1086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180683485032848