Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_015274.1
Length=56506
Score E
Sequences producing significant alignments: (Bits) Value
seq875 104 8e-18
>seq875
Length=1550
Score = 104 bits (114), Expect = 8e-18
Identities = 219/327 (67%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270
||| ||| |||||| | | | || | |||| |||||| || || | | |||| |
Sbjct 1412 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 1353
Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330
|| | ||| || | || ||||| || ||||| | || || ||||| |||||
Sbjct 1352 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 1293
Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390
|| | ||| ||||| ||||| || | | ||| ||||| || || || | ||
Sbjct 1292 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 1233
Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450
||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| ||
Sbjct 1232 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 1173
Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510
|||| ||| || | | ||||||| || ||||||||||| |||| ||| ||
Sbjct 1172 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 1113
Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537
|| || || || || || || ||||
Sbjct 1112 GCCGCGCGGAGGCATCTCCATCGACCC 1086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180683485032848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |