Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq399 96.9 4e-15 >seq399 Length=200650 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||| | ||||||||||| || ||||| ||||| || | ||| || | || Sbjct 106225 ATCATGGTAACATATCCATCGACGTTCGGTGTGTTTGAGCCAGAAGTCAAGAAGGTCTGC 106166 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | |||| || | |||| || || || || | ||||| |||||| | || || ||| Sbjct 106165 GATCTTGTGCACCATTATGGCGGGCAAGTCTACATGGATGGCGCAAATATGAACGCTCAG 106106 Query 159667 GTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAA 159725 | || || | ||| | || || || |||||||| || ||||| ||| | ||||| Sbjct 106105 ATCGGCCTCACTTCTCCAGGA-ACAATTGGCGCAGATGTGTGCCATCTGAACCTGCATAA 106047 Query 159726 GACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 ||| |||||||||||||| || || || || ||||| || || || || ||||| || Sbjct 106046 GACCTTCTGTATTCCACACGGTGGAGGCGGACCTGGTGTCGGACCCATCGGTGTTGC 105990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588002847490080