Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq310 235 1e-56
seq5553 223 6e-53
>seq310
Length=625919
Score = 235 bits (260), Expect = 1e-56
Identities = 974/1517 (64%), Gaps = 47/1517 (3%)
Strand=Plus/Minus
Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746
|| ||| | ||||| | |||| |||||| || || | | | |||||| ||||| |
Sbjct 235894 CATATGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTG 235835
Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806
| ||| | | |||| || |||||| ||||||||| ||| | | |||||||| |||||
Sbjct 235834 CACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGG 235775
Query 212807 GAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------C 212858
| | ||||||| ||| | || || || |||||| || | ||| |
Sbjct 235774 AATGTTGGGGATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTC 235723
Query 212859 ATGTCCTCGTTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTAT 212917
|||| ||| ||||||||| | |||| | || ||| | || |||||||| |
Sbjct 235722 ATGTTCTCTGACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGAC 235664
Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977
|||||| || || | | ||| | | ||||| ||| ||||| ||||||| ||
Sbjct 235663 CTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCA 235604
Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037
|||||| |||| ||||| | || |||||| ||||| || || || || ||
Sbjct 235603 CTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGA 235544
Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097
||| | ||| ||||||| | |||| || | || | ||||||||||| | | |
Sbjct 235543 GTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT 235484
Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157
||| ||| | | | |||||||| |||| | ||| | || ||
Sbjct 235483 -AGGA----GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGA 235433
Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217
||| |||| | ||| || || ||| || || |||||||| || |||| || ||
Sbjct 235432 GCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGC 235373
Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAA 213277
||| | || ||||| ||||| |||| | || |||| ||||||||| || || |||
Sbjct 235372 AGCATGATACATGGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAA 235313
Query 213278 GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCT 213337
||||| | ||| ||||||| || || | ||| || | || |||||||
Sbjct 235312 TGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCG 235253
Query 213338 GTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCT 213396
||| | | ||| ||| | || ||| | ||||| ||||| |||||| |||
Sbjct 235252 GTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACTGGGTAGTAGTTGATCTCGATGGTCT 235194
Query 213397 TGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGT 213456
|||| ||||| || ||| ||||||||||||| | | || | || | | || || |
Sbjct 235193 TGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCT 235134
Query 213457 AGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCT 213516
| | || | || | ||||| || | ||||| ||||| || || ||||
Sbjct 235133 CGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCT 235074
Query 213517 C--CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCC 213574
| ||| ||| | | ||||||||||||||| ||||||| || || |||||||||
Sbjct 235073 CATCTG-GAG-CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCC 235016
Query 213575 CAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCC 213634
|| |||| || || ||| |||||| | |||||||| || ||| | || | ||
Sbjct 235015 AAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCC 234956
Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCT 213694
|||||| ||| | | | || || ||| | | | || || | ||| ||
Sbjct 234955 GGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCT 234900
Query 213695 GACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGA 213753
|| || | | | | | ||| || | ||||| ||||| ||||| |||| || | |
Sbjct 234899 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAA 234840
Query 213754 CCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGA 213813
| ||| || || || ||| ||||| || |||| |||| | | ||
Sbjct 234839 CATCCGACAGACCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGCCGTTCTGTTCGA 234780
Query 213814 CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCT 213873
| | |||||| || || || || | ||| || ||| ||||| || | | | |
Sbjct 234779 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTT 234720
Query 213874 CGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCT 213933
| ||| |||| ||| ||||| || || | || | | || ||| || ||||||||||
Sbjct 234719 CTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCT 234660
Query 213934 CCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCA 213990
| | |||||||||||| || || || | |||| || |||||||| || | ||
Sbjct 234659 CAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAG 234600
Query 213991 CCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCT 214049
|||| ||| || || | ||||| || |||||||| ||| ||||| || || |
Sbjct 234599 TGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCA 234541
Query 214050 ATATACGAGCCGGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACT 214107
|| || ||||| | |||||| | |||| |||| ||| || || || || |||| ||
Sbjct 234540 ATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCT 234483
Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167
||||||||||||| || | | | || || ||| || | ||||||||||| | |
Sbjct 234482 TGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCA 234423
Query 214168 GGTTCAGCAAGAAGCAG 214184
| || ||||||||||
Sbjct 234422 TGGCCACCAAGAAGCAG 234406
>seq5553
Length=468990
Score = 223 bits (246), Expect = 6e-53
Identities = 563/851 (66%), Gaps = 10/851 (1%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| ||| ||||||||
Sbjct 199104 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 199045
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | | ||| ||| | | |||
Sbjct 199044 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGAGTGCTAACAGT 198987
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| |||| |||||| | || ||||||| |||||||||| |||||| || | ||
Sbjct 198986 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 198927
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
|| | ||| | ||| | ||||||| ||| ||| ||||| || | ||
Sbjct 198926 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 198867
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCA 48136
|| || ||| || || ||||| ||| ||| | | || | ||||||
Sbjct 198866 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAGGCG 198810
Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196
||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || | |
Sbjct 198809 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 198750
Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256
|||| || | | || |||||||| || || || ||||| |||||||||||||| |||
Sbjct 198749 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 198690
Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAG 48316
|| || || || || || |||| | |||| | | ||||||||| || |||||
Sbjct 198689 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCAT 198630
Query 48317 GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGC 48376
| ||||||||| |||||| | ||||||||| || | || ||||| ||| ||
Sbjct 198629 CGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGG 198570
Query 48377 TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAG 48436
| | | || || || | || ||| || || | || |||| |||
Sbjct 198569 TATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAG 198510
Query 48437 TGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACT 48496
|| | ||||| || ||||||||| ||||||||| | ||||| | ||||||
Sbjct 198509 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACC 198450
Query 48497 TCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAG 48556
|| | | ||| | ||| | || ||||| ||||| || ||||| || || || |||||
Sbjct 198449 TCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAAT 198390
Query 48557 GCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCCTGT 48613
|| ||||| ||| | ||| || |||| || | |||| || |||||| | ||
Sbjct 198389 GCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGG 198330
Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTAC 48673
| || || ||| || | || || | |||||||| || || || |||||||||
Sbjct 198329 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 198270
Query 48674 ATGCCCCATAT 48684
|| ||||||
Sbjct 198269 ATTTGCCATAT 198259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931456204715520
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