Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq5779 208 2e-49 seq165 87.8 6e-13 >seq5779 Length=696 Score = 208 bits (230), Expect = 2e-49 Identities = 391/572 (68%), Gaps = 2/572 (0%) Strand=Plus/Plus Query 45438 TGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATC 45497 |||| | ||||| || || | || || ||| | || ||||||||| | || | ||| | Sbjct 125 TGAAGAACTATCTTGATTTATTACAGGATATCCTGGATAACGGCGTGCATAAGGGAGACC 184 Query 45498 GGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACG 45557 | || ||||| || || || || || ||| | ||||| || | | || | || | Sbjct 185 GCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCCGAAG 244 Query 45558 GATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCT 45617 | |||||||| || || || || | ||| | || ||||| |||| || | | Sbjct 245 GGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTGTTAT 304 Query 45618 GGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGG 45677 ||||||| | || ||||||||| | |||| || |||| ||||| |||| ||| |||| Sbjct 305 GGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATCTGGG 364 Query 45678 ACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGT 45737 | || ||||| || ||||| || ||| | || || | ||||| | |||||||| | | Sbjct 365 ATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCGCACTT 424 Query 45738 GGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGC 45797 || ||| | | || | | | | || || ||||| || || || | ||| || Sbjct 425 GGGAAGCACCCAATGGAGAGAAGATTGATCAGATTGCAGCTGTAATTGATTCAATTAAAA 484 Query 45798 GCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAA 45857 ||| ||| | || || || || || ||||| ||||| ||||| || | | | Sbjct 485 ACAATCCGGATTCACGACGTCACCTCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACA 544 Query 45858 TGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCAT 45917 |||| ||||||| || |||| ||| |||||||||||||| || | || | |||| Sbjct 545 TGAAACTGCCCCCTTGCCATTTCGCGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCAT 604 Query 45918 GCATG-TGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGC 45976 | ||| | ||| |||||| || ||||| || || || |||| |||||||| || ||| Sbjct 605 GTATGCTCACAA-TGCGTTCCGTGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGC 663 Query 45977 TATGCGCTGTTGACACATATGGTTGCCCAACA 46008 ||||| |||||||||||||| ||||||| || Sbjct 664 TATGCATTGTTGACACATATGATTGCCCAGCA 695 >seq165 Length=1109 Score = 87.8 bits (96), Expect = 6e-13 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 35790 GTCCCGATCATTGTCCTGGCACAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGC 35849 || ||| | |||| | || | || |||| ||||| || |||||| | ||| ||||| Sbjct 491 GTTCCGGTTATTGCCTTGTCTCAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGT 432 Query 35850 CCGACGATGGCAGACCTTCGAGAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCC 35909 |||| |||| ||| | || || |||||| ||||||||| |||||| | | || Sbjct 431 CCGATGATGAGTGACTTGCGGGAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCG 372 Query 35910 TTCCTGTACCGCGAGGACTATTACAATCGGGACGCTGAACAAACAGGAATCACAGAAATT 35969 ||||||||||| || ||||| || || | ||| | || | | | || | || ||| Sbjct 371 TTCCTGTACCGGGATGACTACTATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATT 312 Query 35970 ATTGTTGCCAAAAACCGTAACGG 35992 ||| | |||||| | ||||| || Sbjct 311 ATTATCGCCAAACAGCGTAATGG 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157738077524692