Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq5779 208 2e-49
seq165 87.8 6e-13
>seq5779
Length=696
Score = 208 bits (230), Expect = 2e-49
Identities = 391/572 (68%), Gaps = 2/572 (0%)
Strand=Plus/Plus
Query 45438 TGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATC 45497
|||| | ||||| || || | || || ||| | || ||||||||| | || | ||| |
Sbjct 125 TGAAGAACTATCTTGATTTATTACAGGATATCCTGGATAACGGCGTGCATAAGGGAGACC 184
Query 45498 GGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACG 45557
| || ||||| || || || || || ||| | ||||| || | | || | || |
Sbjct 185 GCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCCGAAG 244
Query 45558 GATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCT 45617
| |||||||| || || || || | ||| | || ||||| |||| || | |
Sbjct 245 GGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTGTTAT 304
Query 45618 GGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGG 45677
||||||| | || ||||||||| | |||| || |||| ||||| |||| ||| ||||
Sbjct 305 GGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATCTGGG 364
Query 45678 ACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGT 45737
| || ||||| || ||||| || ||| | || || | ||||| | |||||||| | |
Sbjct 365 ATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCGCACTT 424
Query 45738 GGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGC 45797
|| ||| | | || | | | | || || ||||| || || || | ||| ||
Sbjct 425 GGGAAGCACCCAATGGAGAGAAGATTGATCAGATTGCAGCTGTAATTGATTCAATTAAAA 484
Query 45798 GCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAA 45857
||| ||| | || || || || || ||||| ||||| ||||| || | | |
Sbjct 485 ACAATCCGGATTCACGACGTCACCTCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACA 544
Query 45858 TGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCAT 45917
|||| ||||||| || |||| ||| |||||||||||||| || | || | ||||
Sbjct 545 TGAAACTGCCCCCTTGCCATTTCGCGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCAT 604
Query 45918 GCATG-TGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGC 45976
| ||| | ||| |||||| || ||||| || || || |||| |||||||| || |||
Sbjct 605 GTATGCTCACAA-TGCGTTCCGTGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGC 663
Query 45977 TATGCGCTGTTGACACATATGGTTGCCCAACA 46008
||||| |||||||||||||| ||||||| ||
Sbjct 664 TATGCATTGTTGACACATATGATTGCCCAGCA 695
>seq165
Length=1109
Score = 87.8 bits (96), Expect = 6e-13
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 35790 GTCCCGATCATTGTCCTGGCACAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGC 35849
|| ||| | |||| | || | || |||| ||||| || |||||| | ||| |||||
Sbjct 491 GTTCCGGTTATTGCCTTGTCTCAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGT 432
Query 35850 CCGACGATGGCAGACCTTCGAGAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCC 35909
|||| |||| ||| | || || |||||| ||||||||| |||||| | | ||
Sbjct 431 CCGATGATGAGTGACTTGCGGGAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCG 372
Query 35910 TTCCTGTACCGCGAGGACTATTACAATCGGGACGCTGAACAAACAGGAATCACAGAAATT 35969
||||||||||| || ||||| || || | ||| | || | | | || | || |||
Sbjct 371 TTCCTGTACCGGGATGACTACTATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATT 312
Query 35970 ATTGTTGCCAAAAACCGTAACGG 35992
||| | |||||| | ||||| ||
Sbjct 311 ATTATCGCCAAACAGCGTAATGG 289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157738077524692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |