Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq5779 86.0 1e-11 >seq5779 Length=696 Score = 86.0 bits (94), Expect = 1e-11 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 122419 AGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCA 122478 |||||| || || ||||| |||| || | || ||| ||| | || | |||||| Sbjct 180 AGACCGCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATC 239 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 |||| |||||||| || || ||||| | || || || |||| |||||| | Sbjct 240 CGAAGGGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTT 299 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 | ||||| | | || ||||| || || |||||||| || || ||| | || Sbjct 300 GTTATGGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGAT 359 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||||||| ||||| || ||| ||||| || | || ||||| ||||| |||||||| Sbjct 360 CTGGGATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCG 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777568059208800