Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1118 224 1e-53 seq1041 156 6e-33 seq3469 147 3e-30 seq5907 102 1e-16 seq131 91.5 2e-13 >seq1118 Length=940645 Score = 224 bits (248), Expect = 1e-53 Identities = 470/698 (67%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | ||| || |||||||| || || || || ||||| || || ||| | | | Sbjct 588174 ATGGCACCAGCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGA 588115 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 ||||||| | ||||| ||| | || || || || ||||| ||||| || || | ||| Sbjct 588114 GATGATCGCATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTC 588055 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| | || ||||| || || || ||| || |||||| Sbjct 588054 GCCTTCACAGACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAAC 587995 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || || || ||||| ||||| ||||| | || || |||||||| || | Sbjct 587994 CCAGCAAACACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAG 587935 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 || |||| ||||| ||| ||| | | | ||| | || | | || | ||||| Sbjct 587934 GTGCAAGCAGATATGAAGCACTTTCCCT-TCAAGGTCATCGAGAAG--GCCGGCAAGCCA 587878 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || || || || | || ||| |||| || || | || || || || || | Sbjct 587877 GTCATCTCGGTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCC 587818 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||| | | | |||||| ||||| || || || | | | ||| || || || | Sbjct 587817 ATGATTCTCACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAAC 587758 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || || || || || || || |||| || || || ||||| || || |||||||| Sbjct 587757 GCCGTCGTCACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCC 587698 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||||| || || ||| || | || ||||| || || || || || || ||| Sbjct 587697 GGCCTCATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATT 587638 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| |||||||| | || | || ||||| | ||||| ||||| ||| Sbjct 587637 GCCTACGGTCTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGT 587578 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || |||| ||||| | ||||| ||||| || ||| | Sbjct 587577 GGTGGTACCTTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCC 587518 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| ||||| | |||||||| || ||||| Sbjct 587517 ACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGA 587480 >seq1041 Length=763809 Score = 156 bits (172), Expect = 6e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || || |||||||||||||||||||| ||||| ||||| || | || | Sbjct 708771 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGACAATGTGAAGAGC 708830 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || |||||||||||||||||||| || |||||||| | ||||| || || || Sbjct 708831 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 708890 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || ||||| | || |||||| |||| |||||| ||||| || Sbjct 708891 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACTCTCCAT 708950 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | ||||| |||||| Sbjct 708951 CTCGTCCTCCGTCTTCGTGGTGGT 708974 Score = 150 bits (166), Expect = 2e-31 Identities = 173/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || |||||||||||||| |||| Sbjct 708970 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGT 709029 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || |||| | ||||| || || ||||| || || ||||| | Sbjct 709030 CCAGCGACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTG 709089 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || |||||||| || || ||||| || ||||| ||||| || | || | Sbjct 709090 ACCAGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCGGACT 709149 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || || || || ||||| ||| | || || | || || |||||| Sbjct 709150 ACAACATCCAGAAAGAATCGACTCTCCACTTGGTGCTTCGTCTCCGTGGTGGT 709202 >seq3469 Length=364275 Score = 147 bits (162), Expect = 3e-30 Identities = 196/272 (72%), Gaps = 3/272 (1%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || |||||||||| ||| || |||| || || |||||||||| ||| || Sbjct 271765 ACCGTCCCAGCTTACTTCAACGATAACCAGAGACAAGCCACCAAGGACGCTGGTGCCATC 271706 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || ||||| || ||||| || || |||||| Sbjct 271705 GCCGGACTCAACGTTCTCCGCATCATCAACGAGCCAACTGCCGCTGCTATCGCATATGGT 271646 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 || | | |||| ||| | || ||| || | |||| ||||| ||||||||| Sbjct 271645 CTCGGCTCCGGCAAGTCTGACAAGGAGCGAAACGTCCTCATCTACGATCTTGGTGGTGGT 271586 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| ||||| | ||| | || ||| | ||| || |||||||| ||| Sbjct 271585 ACTTTCGATGTCTCCCTTCTTCACATTCAGGGCGGTGTCTTCACTGTCAAGGCTACCGCT 271526 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || ||| | |||||| | |||||||| Sbjct 271525 GGTGACACCCATTTGGGTGGTCAGGATTTCGA 271494 Score = 107 bits (118), Expect = 3e-18 Identities = 251/375 (67%), Gaps = 8/375 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG-- 196118 ||||| ||||| || | || || || || |||||||| |||||||| || | |||| Sbjct 271314 GCTCTCCGTCGCCTACGAACCGCTTGCGAGCGTGCCAAGCGAACTCTTTC--CAACGGAA 271257 Query 196119 CTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 ||||||| | | || || ||||| | || || || || ||| | || | || | Sbjct 271256 CTCAAACCACAATCGAAATCGATTCTCTCTTCGATGGCGAGGATTTCAACACCAACATCA 271197 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACCTGT 196236 ||||||| ||||| || || | ||| | | || | || | || | || || Sbjct 271196 CCCGTGCCCGTTTCGAGGACATTAACGCCAAGGCTTTCAACGGCACC--ATCCAGCCAGT 271139 Query 196237 TGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGT 196296 || || || || |||||| || || ||| |||||||| || || || ||||| Sbjct 271138 CGAGCAGGTGCTCAAGGACGCATCAATCGAAAAGAGCAAGGTTGACGAGATCGTGCTTGT 271079 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||||| || || | || || ||||||||| || Sbjct 271078 CGGTGGTTCTACTCGTATTCCAAAGATCCAGAAGCTCCTGTCCGACTTCTTCAACGGCAA 271019 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | | || | |||||||| ||||| || || || || ||||| ||||||||||| Sbjct 271018 GAAGCTCGAGAAGAGCATCAACCCCGATGAGGCTGTCGCATACGGTGCCGCCGTTCAGGC 270959 Query 196417 TGCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 270958 CGGTATCCTCTCTGG 270944 >seq5907 Length=3914 Score = 102 bits (112), Expect = 1e-16 Identities = 254/382 (66%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 198573 GGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTC 198632 ||| | |||||||| ||||||||| | || ||||||||| | || ||||| || |||| Sbjct 399 GGTCCTCCGGGTACAGGTAAAACCTTGCTCGCTCGTGCTGTTGCCGGTGAGGCGGGTGTA 340 Query 198633 CCCTTTCTTCAGTGCT-CCGCGGCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAA 198691 || || |||||| | ||| | ||| | || ||||| || ||||| ||||| Sbjct 339 CCATT-CTTCAGCATTTCCGGTTCTGACTTCGTTGAAATGTTTGTCGGTGTCGGTGCATC 281 Query 198692 GCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATCATCTTCATTGA 198751 || || || || | ||||| | || |||| |||||||||||||| || || Sbjct 280 TCGTGTACGTGACTTGTTTGAAAATGCGAAGAAAAACGCCCCATGTATCATCTTTATCGA 221 Query 198752 TGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCTGGTAATGATGAGCG 198811 ||| ||||| || || || ||||||||| | | |||| | || || || Sbjct 220 TGAAATTGATGCGGTAGGACGTCAGCGTGGTGCTGGTCTTGGTGGTGGTCACGACGAACG 161 Query 198812 TGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTT---TGACAATGAGACTGG 198868 ||| || || | |||||| | ||| ||| ||||||||||| | |||||| || Sbjct 160 TGAACAAACACTCAACCAGTTGCTCGTTGAAATGGATGGTTTCGGAGCCAATGA---AGG 104 Query 198869 TATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCACTGCTTCGTCC 198928 ||| | | |||| ||||| || | || || || || ||| |||| ||||| Sbjct 103 TATTATCATCGTTGCAGCTACGAACCGTGCAGACATTCTGGACCCTGCCTTGCTGCGTCC 44 Query 198929 CGGTCGATTCGACCGTAAGATT 198950 || || || |||||| | ||| Sbjct 43 AGGACGTTTTGACCGTCAAATT 22 >seq131 Length=300712 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/331 (67%), Gaps = 13/331 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || || || | | | || ||| || | | ||||| || || Sbjct 257804 AAGATGAAGGAAGTCGCCGAGTCATACCTCGGCGAAAAGGTCACCAACGCAGTCGTCACA 257863 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || || || |||||||||| | || || Sbjct 257864 GTCCCAGCCTACTTCAACGACGCCCAGCGTGCCGCTACCAAGGACGCTGGCACGATCGCC 257923 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | | |||| ||||| || || || || | || || || || Sbjct 257924 GGTCTCAACGTCCTCCGTGTCGTCAACGAACCTACCGCCGCCGCTCTCGCCTACGGCCTC 257983 Query 195842 GACAAGA---ACAAGGA-CGA-AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 ||||||| ||||||| || |||| | ||| ||| || ||||||||||||| Sbjct 257984 GACAAGACCGACAAGGAACGCCAGATCA-------TTG-TCTACGACCTCGGTGGTGGTA 258035 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | || |||||||| | | | | | || ||| | ||||| || |||| || || | Sbjct 258036 CTTTCGATGTCTCCATCTTGACTGTCGACCAGGGTGTGTTCGAGGTTCAGGCAACGGCCG 258095 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || ||||| |||||||| || ||||| Sbjct 258096 GTGACACCCATCTTGGTGGTGAGGACTTCGA 258126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657808307264160