Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq310 154 4e-32 seq1019 118 3e-21 seq5907 93.3 1e-13 seq2746 93.3 1e-13 seq1758 86.0 2e-11 >seq310 Length=625919 Score = 154 bits (170), Expect = 4e-32 Identities = 558/867 (64%), Gaps = 11/867 (1%) Strand=Plus/Minus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| ||||| |||||||||||||| | ||||||||| || || | | Sbjct 235050 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGG 234991 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| |||||| | || || || ||||| |||| || || ||||| Sbjct 234990 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 234931 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | ||| || || | ||||||| |||||| | Sbjct 234930 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 234871 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | || ||||||||| ||| ||| |||||||| | | |||| Sbjct 234870 TCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGACCAGGGCATTCGTTGGGG 234811 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | ||| | |||| | || | | | ||||||| |||||| | ||| ||| Sbjct 234810 CACATCAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 234752 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | ||| ||||| | || | || || || | || || ||||| || || || Sbjct 234751 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 234692 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055 | ||| | | | || | ||| ||||| || || || |||||| ||| | Sbjct 234691 CATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 234632 Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 | | ||||||||||| || || || |||||||| || || |||| | |||||| || | Sbjct 234631 CTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTAC 234572 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 || ||| ||||| ||||| || || |||| ||| | || || | | | | || || Sbjct 234571 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 234512 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 || ||| || |||||||| || | || || || || ||| ||| | |||| Sbjct 234511 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 234452 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| ||||| ||||| | ||| | | | |||| || || || | Sbjct 234451 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 234392 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||| || ||||| |||| ||||| || | ||||| | || ||||| ||||| Sbjct 234391 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 234332 Query 156356 ATAATCGTATGTCTCCTTAAT--CTTC-TCAAGATTAGACCCGTGAATACAGATAGAGAC 156412 || | ||||||||| ||| || | |||| | ||| ||||| | || || || Sbjct 234331 GTAGTTGTATGTCTC---AATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCAC 234275 Query 156413 CCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGC 156472 | ||| ||| || || || | ||| ||| | || ||||||| |||||||||| Sbjct 234274 ACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCGTCAATTCTGAGAAGGTATGA 234215 Query 156473 GCGTTCCAGAGTTTTAAACCCGAAATA 156499 || |||||||| || || ||||| || Sbjct 234214 TCGCTCCAGAGTCTTGAAGCCGAAGTA 234188 >seq1019 Length=1508174 Score = 118 bits (130), Expect = 3e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | ||||||| | ||| | || ||||||||| || |||||||| | || Sbjct 573870 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 573811 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| ||||||||||||| || |||||||| | ||||| Sbjct 573810 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 573751 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | | | | ||| |||| |||||||| | | | ||||| | || Sbjct 573750 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 573693 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 || ||||| ||| || |||||| | || || ||||| | |||| |||||| || | Sbjct 573692 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 573633 Query 302801 C 302801 | Sbjct 573632 C 573632 >seq5907 Length=3914 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || || ||||||||||| || || || || | ||| || | |||| ||||| || || Sbjct 203 CCTACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCA 262 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || || | |||||| ||||| || | ||| ||| ||||||| || || |||||| || Sbjct 263 AACAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCG 322 Query 289150 GATA-CTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || | |||| ||||| |||| || || || || || || | || || | || || Sbjct 323 GAAATGCTGAA-GAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTT 381 Query 289209 ACCTGTTCCAGGTGGTCC 289226 |||||| || || || || Sbjct 382 ACCTGTACCCGGAGGACC 399 >seq2746 Length=234911 Score = 93.3 bits (102), Expect = 1e-13 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||| || || || |||||||| ||||| ||| | || Sbjct 217705 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 217764 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || ||| || | |||| || ||||| || Sbjct 217765 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 217823 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||| ||||| |||||||||||||| Sbjct 217824 TCCGTGGCGAGATGCAAACTTATCACCAAT 217853 >seq1758 Length=467270 Score = 86.0 bits (94), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || |||| Sbjct 42588 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 42529 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 ||||||| ||||| | |||||| ||||||| |||||||| ||||| ||||| Sbjct 42528 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 42474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471693554292786