Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_021558.1
Length=37644
Score E
Sequences producing significant alignments: (Bits) Value
seq1007 187 6e-43
>seq1007
Length=2700
Score = 187 bits (206), Expect = 6e-43
Identities = 254/350 (73%), Gaps = 7/350 (2%)
Strand=Plus/Minus
Query 23253 AAGGAGGA-ATCACATTGCTGAATCGTACAATTCTTATCGGGCGTTTAACCCGCGATCCA 23311
||||||| || |||||| |||| ||| ||||| ||||| || |||||||| |||||
Sbjct 1441 AAGGAGGGGATTACATTGTTGAACCGTGTCATTCTGATCGGCCGGTTAACCCGGGATCCT 1382
Query 23312 GAATTGAAATATACACCTTCCGGGGTGGCTGTCACCGTCTTTACACTTGCTGTAGATAGA 23371
|| ||| ||||| || | || || || || || ||||| | || || || |||
Sbjct 1381 GAGTTGCGTTATACTCCAGCTGGAGTAGCAGTTACGCAATTTACTTTGGCAGTGGACAGA 1322
Query 23372 CCTTTTACAAATAACGG---AGAGCGTGAAGCGGATTTTATTCCCATCGTTGTTTGGAGA 23428
|| ||||||| | || ||| || ||||||||||| ||||| |||| ||||||
Sbjct 1321 CCGTTTACAAGCCAAGGGGGAGAACGGGAAGCGGATTTCATTCCGGTCGTAACCTGGAGA 1262
Query 23429 CAACTCGCAGAGACGTGCGCCACATATTTACGGAAAGGCCGCCTAACTGCTGTAGAAGGA 23488
|| || || ||||| || || | || || || ||||| |||||| |||| || ||||||
Sbjct 1261 CAGCTTGCTGAGACTTGTGCAAACTACTTGCGCAAAGGACGCCTAGCTGCAGTCGAAGGA 1202
Query 23489 CGAATTCAAACTCGTAACTATGAAAATAACGAAGGGCGAAGAATTTACGTGACAGAAGTT 23548
|| |||||| || || || || ||||||||||| | | | |||||||| |||||
Sbjct 1201 CGCATTCAAGTACGGAATTACGAGAATAACGAAGGAAAACGTGTATACGTGACCGAAGTC 1142
Query 23549 GTAGCAGATAACGTCCGATTCTTGGAAT-AG--AATAGAGATAACAACGG 23595
| || ||||||||||| |||||||| | || || | ||||| |||||
Sbjct 1141 ATTGCCGATAACGTCCGTTTCTTGGAGTCAGCTAACCGTGATAATAACGG 1092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120329799853816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |