Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_021784.1 Length=38099 Score E Sequences producing significant alignments: (Bits) Value seq1999 80.6 6e-11 >seq1999 Length=313 Score = 80.6 bits (88), Expect = 6e-11 Identities = 115/162 (71%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 5430 ACGTCCAGTTCTGCATACATCTGCGCCAATTCCATCGCAGCCGGTGCTAACGCATCATAG 5489 || ||||| || ||||||||| |||| ||||| || || ||||| | |||||||||| Sbjct 231 ACATCCAGCTCGATATACATCTGAGCCATTTCCACAGCCGCTGGTGCAAGCGCATCATAG 172 Query 5490 ATGACAGAACCTTCTTGTTTATCAACATCGTCAGGAACTCGATCAAGCATCCTCTGCAAA 5549 || | ||||| ||||||| | | | || || || | || | ||| | | |||| Sbjct 171 ATAATGCTTCCTTCACGTTTATCTATACCATCCGGTACCCTGTCCAACATTCGATTCAAA 112 Query 5550 ATTGCCTCAAACGTTTGGTCCTCAAACAATACCGCTCACCTC 5591 || | |||||||| || |||||| ||| | | ||||||| Sbjct 111 ATGACTTCAAACGTCTGCTCCTCATACATTCATGTTCACCTC 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121785686120196