Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq429 156 7e-32
seq5553 147 3e-29
seq2398 118 2e-20
seq310 89.7 8e-12
seq4641 86.0 1e-10
>seq429
Length=503761
Score = 156 bits (172), Expect = 7e-32
Identities = 177/235 (75%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| |||
Sbjct 115681 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 115622
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| ||||||| |||||||| ||||| | ||| || |||||| || |
Sbjct 115621 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 115563
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | |||||||| ||| ||| |||| ||||||||||| || |||||||
Sbjct 115562 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 115503
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
||| ||||| | ||||||||| || ||| ||||| ||||||||||| ||
Sbjct 115502 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 115448
>seq5553
Length=468990
Score = 147 bits (162), Expect = 3e-29
Identities = 318/474 (67%), Gaps = 4/474 (1%)
Strand=Plus/Plus
Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979
|| |||||||||||||||| | ||||||||||| || |||||| | || | |
Sbjct 402853 GGGTCGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAACCATCG 402912
Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039
|||||| | ||| || ||||||||||| || | | | ||||| ||
Sbjct 402913 AACGCCTCAAAATCATCGCCAAAGATGGCAACATGCCACACGTAATCATCTCGGGCATGC 402972
Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099
|||| | ||||| ||||| || ||||| |||||| ||||| ||||| |||
Sbjct 402973 CCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCGCAGCCT 403032
Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159
| | || ||||| ||||||||||| || || ||||||||||| | |||||||| || |
Sbjct 403033 ACAAAGAAGCCGTCCTCGAACTCAACGCCTCGGACGAGCGCGGAATCGACGTCGTACGAA 403092
Query 2019160 GAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGT 2019217
||||| || || ||| ||||| || || || |||| || || ||| |
Sbjct 403093 ACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCAGAAGAT 403150
Query 2019218 GATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGAC 2019277
| || || ||||| || || || | || || | || |||||||| || || ||
Sbjct 403151 TGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCGCCGAAC 403210
Query 2019278 CATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGT 2019337
||||||| |||| | |||||| || || || | || |||||| ||| | |
Sbjct 403211 GATGGAAATCTACAGTAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGAACAAAAT 403270
Query 2019338 CATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391
|||||| | ||||| || ||||| ||||| |||| ||||| ||||||||
Sbjct 403271 CATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCGA 403324
Score = 122 bits (134), Expect = 1e-21
Identities = 177/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| |||||||| || ||| |||||| |||||||||||||| | |
Sbjct 199117 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 199058
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
|||| || |||||| | ||| ||||||| | |||| ||||| | ||||
Sbjct 199057 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 198998
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | || ||||| |||||||||||||||||||| || |||||||| | |||||||
Sbjct 198997 GTGCTAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 198938
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
| || | ||| || || | || | | ||||| | ||||||| ||||||||
Sbjct 198937 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 198878
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 198877 CGGTGATGAT 198868
>seq2398
Length=1292672
Score = 118 bits (130), Expect = 2e-20
Identities = 104/130 (80%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691
|| ||| | |||||||||||||||||| | || |||||| | || ||||| | || |||
Sbjct 535235 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 535294
Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751
||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || |||
Sbjct 535295 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 535354
Query 2035752 ATCAAGTACG 2035761
|| || |||
Sbjct 535355 ATTCAGAACG 535364
>seq310
Length=625919
Score = 89.7 bits (98), Expect = 8e-12
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
||||||| || || ||||| | | ||| || || | ||| |||||||| ||| |||
Sbjct 235673 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 235614
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| | ||||| ||||||||| |||| ||| || ||||| ||||
Sbjct 235613 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 235555
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780
||||| ||||||||||||| |||| || | || | || || || ||| |||||||
Sbjct 235554 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 235496
Query 2069781 CCAGCGGCCG 2069790
|||| || ||
Sbjct 235495 CCAGAGGTCG 235486
>seq4641
Length=851709
Score = 86.0 bits (94), Expect = 1e-10
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369
|||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| ||||
Sbjct 169724 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 169783
Query 2175370 CATAGGCGCGCATGA 2175384
||||||||||||||
Sbjct 169784 GATAGGCGCGCATGA 169798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915546668137742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |