Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq429 156 7e-32 seq5553 147 3e-29 seq2398 118 2e-20 seq310 89.7 8e-12 seq4641 86.0 1e-10 >seq429 Length=503761 Score = 156 bits (172), Expect = 7e-32 Identities = 177/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| ||||| || ||||||||| |||| ||||| ||| ||| Sbjct 115681 GTACTTGGTGACAGCCTTGGTGCCCTCAGACACGGCGTGCTTGGCAAGTTCACCGGGCAG 115622 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| ||||||| |||||||| ||||| | ||| || |||||| || | Sbjct 115621 GATCAGTCGCACGGATGTCTGGATTTCGCGCGATGAGATGGTCGACTTCTTGTT-GTATG 115563 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| ||| ||| |||| ||||||||||| || ||||||| Sbjct 115562 CAGCGAGCTTGGATGCCTCGGTTGCGACGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 115503 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| ||||| | ||||||||| || ||| ||||| ||||||||||| || Sbjct 115502 GGATGGACATGGCGCGGTTGGAGATACCGGTGTCTGGGTGAACCTGCTTGAGGAC 115448 >seq5553 Length=468990 Score = 147 bits (162), Expect = 3e-29 Identities = 318/474 (67%), Gaps = 4/474 (1%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||||||||||||||| | ||||||||||| || |||||| | || | | Sbjct 402853 GGGTCGAAAAGTACCGCCCCGTCTTCCTCGACGACATAGTCGGCAACACCGAAACCATCG 402912 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 |||||| | ||| || ||||||||||| || | | | ||||| || Sbjct 402913 AACGCCTCAAAATCATCGCCAAAGATGGCAACATGCCACACGTAATCATCTCGGGCATGC 402972 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 |||| | ||||| ||||| || ||||| |||||| ||||| ||||| ||| Sbjct 402973 CCGGAATCGGCAAAACCACCTCAGTCCTCTGCCTCGCGCGCCAACTCTTAGGCGCAGCCT 403032 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | || ||||| ||||||||||| || || ||||||||||| | |||||||| || | Sbjct 403033 ACAAAGAAGCCGTCCTCGAACTCAACGCCTCGGACGAGCGCGGAATCGACGTCGTACGAA 403092 Query 2019160 GAATCATCAA--GCATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGT 2019217 ||||| || || ||| ||||| || || || |||| || || ||| | Sbjct 403093 ACCGAATCAAGGGCTTCGCGC--AGAAAAAGGTCACACTCCCCGCCGGGCGGCAGAAGAT 403150 Query 2019218 GATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGAC 2019277 | || || ||||| || || || | || || | || |||||||| || || || Sbjct 403151 TGTAATTCTAGATGAAGCAGATAGCATGACTTCAGGAGCGCAGCAGGCACTGCGCCGAAC 403210 Query 2019278 CATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGT 2019337 ||||||| |||| | |||||| || || || | || |||||| ||| | | Sbjct 403211 GATGGAAATCTACAGTAGCACGACCCGCTTCGCCTTCGCTTGCAACCAATCGAACAAAAT 403270 Query 2019338 CATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGA 2019391 |||||| | ||||| || ||||| ||||| |||| ||||| |||||||| Sbjct 403271 CATCGAGCCTCTCCAATCGCGCTGCGCAATCTTACGCTACGCGCGACTCACCGA 403324 Score = 122 bits (134), Expect = 1e-21 Identities = 177/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 199117 TGACACCAGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 199058 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | |||| ||||| | |||| Sbjct 199057 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGA 198998 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | || ||||| |||||||||||||||||||| || |||||||| | ||||||| Sbjct 198997 GTGCTAACAGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCA 198938 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || | ||| || || | || | | ||||| | ||||||| |||||||| Sbjct 198937 TCCCCAGAAGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCT 198878 Query 794131 CGATGATGAT 794140 || ||||||| Sbjct 198877 CGGTGATGAT 198868 >seq2398 Length=1292672 Score = 118 bits (130), Expect = 2e-20 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 2035632 TTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGC 2035691 || ||| | |||||||||||||||||| | || |||||| | || ||||| | || ||| Sbjct 535235 TTCGAGATCATCCTCGCCGCCAACTACATGGATATCAAGGCTCTTCTCGACGTCGGCTGC 535294 Query 2035692 AAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAAC 2035751 ||||| || |||||| | ||||||||||||||||| || || ||||| ||||| || ||| Sbjct 535295 AAGACAGTCGCCAACATGATCAAGGGCAAGTCGCCAGAAGAGATCCGAAAGACGTTCAAC 535354 Query 2035752 ATCAAGTACG 2035761 || || ||| Sbjct 535355 ATTCAGAACG 535364 >seq310 Length=625919 Score = 89.7 bits (98), Expect = 8e-12 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661 ||||||| || || ||||| | | ||| || || | ||| |||||||| ||| ||| Sbjct 235673 GGTTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATG 235614 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721 | ||| | |||| | ||||| ||||||||| |||| ||| || ||||| |||| Sbjct 235613 GC-TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCA 235555 Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACT-GTCGCACCAGCGCCCGCAGGGCGTCCCAGTC 2069780 ||||| ||||||||||||| |||| || | || | || || || ||| ||||||| Sbjct 235554 ACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC-CCTTGAGTGCGGCCCAGTC 235496 Query 2069781 CCAGCGGCCG 2069790 |||| || || Sbjct 235495 CCAGAGGTCG 235486 >seq4641 Length=851709 Score = 86.0 bits (94), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369 |||||| ||| |||||| || |||||||||||| ||||| || ||||| ||||| |||| Sbjct 169724 CGTCGATGTCTGGGTCGTTGATCAGGCCCTTCCAGCCGACTGTGGTGCGTGGCTTCTCGA 169783 Query 2175370 CATAGGCGCGCATGA 2175384 |||||||||||||| Sbjct 169784 GATAGGCGCGCATGA 169798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915546668137742