Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_022767.1
Length=81656
Score E
Sequences producing significant alignments: (Bits) Value
seq1892 152 3e-32
>seq1892
Length=2235
Score = 152 bits (168), Expect = 3e-32
Identities = 407/615 (66%), Gaps = 28/615 (5%)
Strand=Plus/Plus
Query 63341 CGAAGTATTCACCTGTTTCCCATTCAGAACCTTCGAATAATGGATATTCTTCTTTCTCTT 63400
||||||||| ||||||| ||| || ||||||| |||| ||||| | | |||| || |
Sbjct 1381 CGAAGTATTTGCCTGTTTGCCAATCGGAACCTTGGAATTTCGGATAATGTCCTTTTTCCT 1440
Query 63401 TCGCCAATTTCATACTAGCTTTGATGGTATAATAAGCAATATCTTCGTACAAACTATCGT 63460
| | || || ||| || ||||| | | ||| ||| | ||| |||| | ||||||
Sbjct 1441 TGGACAGTTCCATGCTGGCTTTCACGAGCAGATAGTTAATTTTTTCATACAGATTATCGT 1500
Query 63461 TAAAATCTACTGCTTCTTGTGTTTCCCATCTGATCTTTTTCTGAACAAGTAGATCGTGTA 63520
|| | |||||||||| | |||||| | || || || |||| || | || |
Sbjct 1501 TATATGTGACTGCTTCTTCCGATTCCCAACGAATGCCTTCGAGAGCAAGCAGGTGATGGA 1560
Query 63521 GACCATATGTTCCTAAACCAATAGCACGGTAACGTTTGTTAGTGTATT----TAGCAACA 63576
| || ||||||| | ||||| |||||||| | |||| ||||||| | ||| ||
Sbjct 1561 GTCCGAATGTTCCCAGACCAACCGCACGGTATTGGCTGTTGGTGTATTGGGCTTGCAGCA 1620
Query 63577 GCTAAAGGTAAATCGTTAAGATCGATAACGTTATCCAGCATACGAACCTGGATGTTAATT 63636
| || || ||| | ||||| ||||| || |||||||||||||| || |
Sbjct 1621 CTTCAATGTT----GTTGATGTCGATTACGTTGTCTAGCATACGAACCTGAATCGGTACC 1676
Query 63637 AATCGTTCTAACACATCATCAGTAACAGCACGAGCTAAGTTAATGGAAGACAAGTTACAT 63696
| || || || ||||||| || || ||||| || |||| |||||| || || |||
Sbjct 1677 AGACGCTCCAATACATCATGAGGCACGGCACGTGCCAAGTGAATGGAGTTCAGATTGCAT 1736
Query 63697 ACTACCATATCACCTAATACTTT----TTCTTGAGTC--GAACGGCC-TGTTT--TT--- 63744
||||| | ||| || ||||| || || | | | || | ||| ||
Sbjct 1737 ACTACGAAATCGCCCGGCACTTTGGAAATCACGATGCGGGTTTGTCCATCTTTGGTTACG 1796
Query 63745 AGGTCTAATTTTTCATCAAGGTAATAAGTTTGTGATTGGTTTTGTGTAATTTCTGTACAT 63804
|| ||| |||||| | | ||| |||||||| || | ||||| |||||
Sbjct 1797 AGCTCTTCCTTTTCAACTA------CCGTTGCAGATTGGTTCTGCATGATTTCAGTACAA 1850
Query 63805 AAGTTAGAGCAGTAAATCATACC-TTTATGTTTTTGTGAGTTCTCACGGTTAACTTGGTC 63863
| ||| || |||| | ||| || | | || || || ||| |||||| || ||
Sbjct 1851 AGGTTGGAAGAGTACACCATGCCGTGTGCATTGTTCGGA-TTCGAACGGTTGACGGTATC 1909
Query 63864 ACGATAGAACATATATGGTGTACCTGTTTCCAATTGAGAACGCATGATACCCTTCATAAT 63923
|| |||||||| || || ||||||||||||| ||| || ||||| || ||||| ||
Sbjct 1910 CCGGTAGAACATGTAAGGCGTACCTGTTTCCAGTTGGGACTTCATGACACGTTTCATGAT 1969
Query 63924 GTCAATAGCAGGAAC 63938
|||||| || ||||
Sbjct 1970 GTCAATCGCCTGAAC 1984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261153461811586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |