Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq165 132 1e-26 >seq165 Length=1109 Score = 132 bits (146), Expect = 1e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 33164 TGAAACAAATGGCCCGCGAATTGGATGTTGTTGTCATTGCATTGTCCCAATTAAGCCGGA 33223 ||||||| || | ||| |||||||| ||| || ||||| ||||| || | |||||| Sbjct 517 TGAAACAGATTGGCCGGGAATTGGAAGTTCCGGTTATTGCCTTGTCTCAGCTGAGCCGGG 458 Query 33224 GCGTTGAGAACCGACAAGAAAAACGGCCGACAATGAGCGATTTGCGAGAAAGCGGCCAAA 33283 | || ||| | || || || ||||| |||| ||||| || ||||| ||| || | Sbjct 457 GTGTAGAGCAACGTCAGGATAAACGTCCGATGATGAGTGACTTGCGGGAATCGGGATCGA 398 Query 33284 TTGAGCAAGATGCCGATATAATACAATTTTTGTATCGTGATGATTATTATAACCCGGATA 33343 | ||||||||||| || || || || |||| || ||||| || ||||||| ||| | Sbjct 397 TCGAGCAAGATGCTGACATCGTAGCGTTCCTGTACCGGGATGACTACTATAACCAGGAGA 338 Query 33344 CCGAAAATAAAAACATCATTGAGGTTATCGTGGCGAAACACCGAAACGGCCCG 33396 |||| || |||||||| || ||| |||| | || ||||| || || || ||| Sbjct 337 CCGAGAAGAAAAACATTATCGAGATTATTATCGCCAAACAGCGTAATGGTCCG 285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124918241405440