Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq4879 334 2e-86 seq1346 277 6e-69 >seq4879 Length=2170 Score = 334 bits (370), Expect = 2e-86 Identities = 1036/1589 (65%), Gaps = 27/1589 (2%) Strand=Plus/Plus Query 54204 GAAATGGTTTCTTGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAAT 54263 ||| |||||||||| ||| | | |||||||||||| |||| || || | Sbjct 2 GAACTGGTTTCTTGCTTCCTGCTTGAAATGGATGATTCACTGAACTCCATAAACTATGTA 61 Query 54264 ATCAATACTGCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAA 54323 | || ||| ||||| ||||| ||||| || || || || || | ||||| || || Sbjct 62 CTGAACACTTGTATGCAGTTATCCAAAATCGGTGGTGGAGTGGCTGTCAACCTGTCGAAG 121 Query 54324 CTTAGAGGAAGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCA 54383 | | | | ||| ||||||||| | || | ||||| || | || Sbjct 122 TTGCGTGCTCGCGGAGAAGTCATTAAAGGTGTCGAAGGGGCTGCGAAAGGCATTACGCCT 181 Query 54384 GTTATGAAACTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGC 54443 ||| | || || | || ||| | |||||||| || ||||| | || ||| | || || Sbjct 182 GTTCTCAAGCTGATGGAGGATGGTTTCTCTTACGCCGATCAGATGGGTCAACGGAAGGGT 241 Query 54444 GCTGGAGCTGTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAA 54503 |||| || | |||| || || ||| ||||| |||| ||| | | || | |||| Sbjct 242 TCTGGCGCAGCATACTATAATATTTTCGGTTGGGACGTTATGGAACTGCTGGACAGTAAA 301 Query 54504 AAGATCAATGCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAATTGCTGAA 54563 ||||||||||| || || ||| | | | || || | ||||| ||| | || | | Sbjct 302 AAGATCAATGCGGACGAGAAAATCCGTCTGAAAACTCTCTCTATCGGACTTATCGTTCCT 361 Query 54564 AAAATC-TTCTTCCAATTAGCAAAAAGA-AACGAAGAAATGTATGTTTTTGCTCCTCACT 54621 || || || || || | |||| || || ||||| | || || ||| | Sbjct 362 AA--TCGTTTTTATAAGCTGGCTCAAGATAATGAGCCCTTGTATCTCTTCGCACCTTATA 419 Query 54622 CGGTTTACAGAGCTTATGGTGAACATTTAGATGACATGGATTTAAATGTTATGTATGATA 54681 || || | || ||||| |||||| ||||| |||||| | |||| |||||||||| Sbjct 420 GTGTCTATAAGGCGTATGGAACACATTTGGATGATATGGATCTGGATGTGATGTATGATA 479 Query 54682 AGTTAGT---TAAAAACCCAGCTGTTAAGAAACGTAAGTTAAAT--TTAACTGCTCGCGA 54736 ||| | | | ||| ||| ||||| | || |||| |||| ||| || || Sbjct 480 CGTTGCTCGCTGACGACCG---TGTGAAGAA--GAAA---AAATCGTTAAGTGCACGGGA 531 Query 54737 AATGCTTATTAAAATTGCTATTATTCAATTAGAATCTGGCTACCCTTATTTTATGTACAA 54796 ||||| | ||||| || || |||||| | ||||| ||||| || ||| | || | || Sbjct 532 TATGCTGACCAAAATAGCGATGATTCAACTTGAATCCGGCTATCCCTATATCATTAATAA 591 Query 54797 AACTAACGCTAATGATACTCACGCATTAAAAGATATTGGCCAAGTTAAAATGAGTAATCT 54856 ||| || |||||| | | || || |||||| | | || ||||| |||||| || || Sbjct 592 AACCAATGCTAATCAAGCACATGCCTTAAAAAACGTAGGACAAGTCAAAATGTCCAACCT 651 Query 54857 TTGTACGGAAATCTTCCAATTACAAGAGACATCTACTATTAATAACTATGGT--ACTGAT 54914 || || || ||||||||| | || ||||| ||| |||| |||||||| || | Sbjct 652 CTGCACAGAGATCTTCCAACTTCAGGAGACTTCTGAAATTACAGACTATGGTCAACCG-- 709 Query 54915 GATGAAATCAAGAGAGATATCAACTGTAATTTAGGTTCATTAAATATTGTTAATGTAATG 54974 ||| ||| | |||||| | ||| || | | || | |||||||||||||| ||| Sbjct 710 GATATTATCCGCAAAGATATTAGCTGCAACCTGGCCTCCCTCAATATTGTTAATGTTATG 769 Query 54975 GAATTAAAAGCAA--TTAGAGATTCAGTTCATGCTGGTGTCGAAGCATTAACATCAGTTT 55032 || | |||| | | || || ||||||| || | ||| | ||||| || Sbjct 770 GAG--AGTGGCAAGATCAAGGAATCCGTTCATGAGGGAATGATCGCACTGACATCCGTCA 827 Query 55033 CTGATATTACTTCAATTGAAAATGCCCCTACAGTTAAGAAAGCTAATGATGAACTTCACG 55092 || || || ||| ||||| ||| || ||||| || ||| | || Sbjct 828 GCGACATGACGCATGTTGCCAATGCTCCTGGTGTAGCCAAAGCCAACTCCGAAATGCATT 887 Query 55093 CTATTGGTTTGGGTTCTATGAACTTACACGGATGGTTAGCTAAAAATAAAATTAATTACG 55152 | ||||||||||| | ||||| | ||||| | || || || || | ||| ||| | Sbjct 888 CCGTTGGTTTGGGTGCCATGAATCTGCACGGTTATTTTGCCAAGAACAGGATTGCTTATG 947 Query 55153 A-ATCTCCTGAAGCTCTAGATTTCGTTAGAACTTTCTATATGGCAGTAAACTACTATTCT 55211 | | ||| ||||| ||||| || | || |||| |||| | | || || |||| Sbjct 948 AGAGCTCG-GAAGCCAAGGATTTTGTACGTACCTTCTTTATGACCATGAATTATCATTCC 1006 Query 55212 ATTGAGAAAAGTATGATGATCGCTAAAGAAACTGGGGTTAAGTTTAAAGACTTTGAAAGA 55271 | |||||||||||| | | || | |||| || ||| | | ||||| Sbjct 1007 CTGGAGAAAAGTATGGAGTTTGCAATGCAAACCGGCCAACGGTTCCATGGATTTGAGGAG 1066 Query 55272 TCAGAATATGCAAAAGGTACTTATTTTGCTAAATATCTTAAAAACGATTACTCTCCTAGA 55331 || || ||||| | ||| ||||||| | ||| | | | |||||| ||| | Sbjct 1067 TCCGACTATGCGACTGGTGTATATTTTGATCGTTATGTGACCACGGATTACCGTCCCAAC 1126 Query 55332 ACTGAAAAAATCAAACAAATGTTTGATGGAATTGAAATTCCTTCTCAATCAGATTGGGAG 55391 || ||| | ||||| ||||| | |||||||| ||||||| | |||||| | Sbjct 1127 ACATCGAAAGTACAACAATTGTTTAACGGAATTGATGTTCCTTCGCCCGATGATTGGAAA 1186 Query 55392 AATTTAATGTTTGATGTTAAGAAATATGGTTTATACCATGCTTACCGTCTGGCAACAGCA 55451 | | | ||| | || | | || |||| | || ||||| || || |||| | || Sbjct 1187 CAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATGGCTATTGCT 1246 Query 55452 CCAACACAAAGTATTTCTTATATTCAAAATGCAACGCCAAGTGTTATGCCAATTGTAGAT 55511 |||||| ||| || |||||||| ||||||||||| | ||||| ||||| |||||||| Sbjct 1247 CCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCCATTGTAGAA 1306 Query 55512 CATATTGAAGCTAGAACATATGCTAACTCTACAACATACTATCCAATGCCTTATTTGTCA 55571 || ||||| | |||| ||||| || || || || || ||||| ||||| ||||| | Sbjct 1307 CAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCCTATTTACAA 1366 Query 55572 TTAGATACTTTCTGGTATTATAAATCAGCATATAATACAAATCAATTTAAATTAATTGAC 55631 |||| | ||| ||||| |||||||| ||| | | ||||||| || ||||||| Sbjct 1367 AAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAGGTAATTGAT 1426 Query 55632 ATTATTGCTGAAATGCAAGAACATGTAGACCAAGGTATTAGTACAATTTTATATGTAAAT 55691 | ||||| || || || ||||| |||||||| || |||||| | ||||||| Sbjct 1427 TTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTCCACAATTCTTCATGTAAAC 1486 Query 55692 AGCGATATTACCACTAGCGAATTAGCTAGATATTATATTTATGCAAGTGAAAAAGGATTA 55751 || ||| | ||||| | ||||| ||| | | ||| | ||||| | | ||||| || Sbjct 1487 AGTGATGTATCCACTCGAGAATTGGCTCGCTGTTACCTGTATGCTGCTCATAAAGGGTTG 1546 Query 55752 AAGAGTCTTTACTACACTAGAACGAATAA 55780 || ||| ||||| || ||||| || || Sbjct 1547 AAATCTCTGTACTATACAAGAACCAACAA 1575 >seq1346 Length=1390 Score = 277 bits (306), Expect = 6e-69 Identities = 522/758 (69%), Gaps = 26/758 (3%) Strand=Plus/Plus Query 188450 AATTAAAATGTTCATTCTGTGGGAAGCCGCAAGAGCACGTTCGTAAATTAGTTGCAGGTC 188509 |||| ||||| || || || || || | || || || || || ||| | || || || | Sbjct 634 AATTGAAATGCTCTTTTTGCGGTAAATCTCAGGAACAGGTGCGCAAACTGGTCGCTGGAC 693 Query 188510 CAAATGTTCACATTTGTGATGAATGTATTAGTTTATGTTCTGAAATTGTTGAAGAGGAAT 188569 || ||| ||||||||||||||||||| | || ||||||| ||||| || || Sbjct 694 CAGGCGTTTACATTTGTGATGAATGTATCGAACTTTGCACTGAAATCGTTGAGGAAGAGC 753 Query 188570 TAGAGACA--ACTGAAGAATT----CTCAATGGAAGATGTTCCACTTCCAAATGAAATTG 188623 | | | || || |||||| | ||||| |||| ||||| ||||| ||||| Sbjct 754 TCG-GTCATGAC-GAAGAACTGGACCTCAA----AGATATTCCAAAACCAAAAGAAATCC 807 Query 188624 TTGAATTATTAGATAATCATATTATTGGACAAGAAAAAGCAAA-ACGTCAATTAGCTGTA 188682 ||| | | || | | |||||||||| || | || || | ||| || |||| Sbjct 808 GTGATATTCTGGACCAGTACGTTATTGGACAGGATCAGGCGAAGAAGTCT-TTGTCTGTT 866 Query 188683 TCAGTTTATAATCATTATAAGCGCATTAATGCTCTTAATGaaaaatcaaaaaatgatgat 188742 | ||||| ||||| ||||| || || || | | ||| ||| | ||| || Sbjct 867 GCGGTTTACAATCACTATAAACGGATCAACACAC--------AAAGCAAGAT-TGAGGAC 917 Query 188743 ggagtaaagatcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACA 188802 | | | | ||||||| ||| || | | | || ||||| |||||||||||||| Sbjct 918 GTTGAATTG--CAAAAAAG-TAACATTTTGCTGTTAGGACCTACGGGTTCAGGTAAAACG 974 Query 188803 TTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACT 188862 || |||| ||||| |||| | || | |||| ||| | ||||| ||||||| ||| Sbjct 975 TTGCTTGCGCAAACGATGGCCAAAATCCTTAATGTTCCTTTTGCTATTGCTGATGCGACT 1034 Query 188863 TCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATC 188922 || || || |||||||||||||| || || ||||| || ||| | |||| | || Sbjct 1035 TCATTGACGGAAGCTGGTTATGTCGGCGAGGATGTAGAGAACATTCTGCTCAAGCTGATT 1094 Query 188923 CAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTA 188982 ||||| ||||| || ||| | ||| ||| || || || ||| | |||||||||||| | Sbjct 1095 CAAGCTGCTGACTATGATGTGGAAAAAGCAGAGCGCGGCATTATTTATATCGATGAAATT 1154 Query 188983 GATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGA 189042 |||||| | || | ||||| || | | |||||||||| || |||||||| || |||||| Sbjct 1155 GATAAAGTAGCACGTAAATCCGAGAACCCATCCATTACACGTGATGTATCGGGTGAAGGA 1214 Query 189043 GTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGT 189102 || || || || | || |||||| | ||||| || || || || || || |||||| Sbjct 1215 GTTCAACAGGCGCTTTTGAAAATCCTGGAAGGAACTGTAGCTTCTGTACCACCACAAGGT 1274 Query 189103 GGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATT 189162 || ||||| || || || || ||| | || |||| ||||| || || |||||||| ||| Sbjct 1275 GGCCGTAAGCATCCGCATCAGGAATTCATTCAAATTGATACCACCAACATCTTGTTCATT 1334 Query 189163 CTTGGTGGAGCGTTTGATGGTCTTGAAAACATTATCAA 189200 || || || |||||||| || || | || ||||| Sbjct 1335 TGCGGCGGTGCTTTTGATGGGCTGGAGCAAATGATCAA 1372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591776232796544