Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq4879 334 2e-86
seq1346 277 6e-69
>seq4879
Length=2170
Score = 334 bits (370), Expect = 2e-86
Identities = 1036/1589 (65%), Gaps = 27/1589 (2%)
Strand=Plus/Plus
Query 54204 GAAATGGTTTCTTGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCAAT 54263
||| |||||||||| ||| | | |||||||||||| |||| || || |
Sbjct 2 GAACTGGTTTCTTGCTTCCTGCTTGAAATGGATGATTCACTGAACTCCATAAACTATGTA 61
Query 54264 ATCAATACTGCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCTAAA 54323
| || ||| ||||| ||||| ||||| || || || || || | ||||| || ||
Sbjct 62 CTGAACACTTGTATGCAGTTATCCAAAATCGGTGGTGGAGTGGCTGTCAACCTGTCGAAG 121
Query 54324 CTTAGAGGAAGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTACCA 54383
| | | | ||| ||||||||| | || | ||||| || | ||
Sbjct 122 TTGCGTGCTCGCGGAGAAGTCATTAAAGGTGTCGAAGGGGCTGCGAAAGGCATTACGCCT 181
Query 54384 GTTATGAAACTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAAGGC 54443
||| | || || | || ||| | |||||||| || ||||| | || ||| | || ||
Sbjct 182 GTTCTCAAGCTGATGGAGGATGGTTTCTCTTACGCCGATCAGATGGGTCAACGGAAGGGT 241
Query 54444 GCTGGAGCTGTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACTAAA 54503
|||| || | |||| || || ||| ||||| |||| ||| | | || | ||||
Sbjct 242 TCTGGCGCAGCATACTATAATATTTTCGGTTGGGACGTTATGGAACTGCTGGACAGTAAA 301
Query 54504 AAGATCAATGCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAATTGCTGAA 54563
||||||||||| || || ||| | | | || || | ||||| ||| | || | |
Sbjct 302 AAGATCAATGCGGACGAGAAAATCCGTCTGAAAACTCTCTCTATCGGACTTATCGTTCCT 361
Query 54564 AAAATC-TTCTTCCAATTAGCAAAAAGA-AACGAAGAAATGTATGTTTTTGCTCCTCACT 54621
|| || || || || | |||| || || ||||| | || || ||| |
Sbjct 362 AA--TCGTTTTTATAAGCTGGCTCAAGATAATGAGCCCTTGTATCTCTTCGCACCTTATA 419
Query 54622 CGGTTTACAGAGCTTATGGTGAACATTTAGATGACATGGATTTAAATGTTATGTATGATA 54681
|| || | || ||||| |||||| ||||| |||||| | |||| ||||||||||
Sbjct 420 GTGTCTATAAGGCGTATGGAACACATTTGGATGATATGGATCTGGATGTGATGTATGATA 479
Query 54682 AGTTAGT---TAAAAACCCAGCTGTTAAGAAACGTAAGTTAAAT--TTAACTGCTCGCGA 54736
||| | | | ||| ||| ||||| | || |||| |||| ||| || ||
Sbjct 480 CGTTGCTCGCTGACGACCG---TGTGAAGAA--GAAA---AAATCGTTAAGTGCACGGGA 531
Query 54737 AATGCTTATTAAAATTGCTATTATTCAATTAGAATCTGGCTACCCTTATTTTATGTACAA 54796
||||| | ||||| || || |||||| | ||||| ||||| || ||| | || | ||
Sbjct 532 TATGCTGACCAAAATAGCGATGATTCAACTTGAATCCGGCTATCCCTATATCATTAATAA 591
Query 54797 AACTAACGCTAATGATACTCACGCATTAAAAGATATTGGCCAAGTTAAAATGAGTAATCT 54856
||| || |||||| | | || || |||||| | | || ||||| |||||| || ||
Sbjct 592 AACCAATGCTAATCAAGCACATGCCTTAAAAAACGTAGGACAAGTCAAAATGTCCAACCT 651
Query 54857 TTGTACGGAAATCTTCCAATTACAAGAGACATCTACTATTAATAACTATGGT--ACTGAT 54914
|| || || ||||||||| | || ||||| ||| |||| |||||||| || |
Sbjct 652 CTGCACAGAGATCTTCCAACTTCAGGAGACTTCTGAAATTACAGACTATGGTCAACCG-- 709
Query 54915 GATGAAATCAAGAGAGATATCAACTGTAATTTAGGTTCATTAAATATTGTTAATGTAATG 54974
||| ||| | |||||| | ||| || | | || | |||||||||||||| |||
Sbjct 710 GATATTATCCGCAAAGATATTAGCTGCAACCTGGCCTCCCTCAATATTGTTAATGTTATG 769
Query 54975 GAATTAAAAGCAA--TTAGAGATTCAGTTCATGCTGGTGTCGAAGCATTAACATCAGTTT 55032
|| | |||| | | || || ||||||| || | ||| | ||||| ||
Sbjct 770 GAG--AGTGGCAAGATCAAGGAATCCGTTCATGAGGGAATGATCGCACTGACATCCGTCA 827
Query 55033 CTGATATTACTTCAATTGAAAATGCCCCTACAGTTAAGAAAGCTAATGATGAACTTCACG 55092
|| || || ||| ||||| ||| || ||||| || ||| | ||
Sbjct 828 GCGACATGACGCATGTTGCCAATGCTCCTGGTGTAGCCAAAGCCAACTCCGAAATGCATT 887
Query 55093 CTATTGGTTTGGGTTCTATGAACTTACACGGATGGTTAGCTAAAAATAAAATTAATTACG 55152
| ||||||||||| | ||||| | ||||| | || || || || | ||| ||| |
Sbjct 888 CCGTTGGTTTGGGTGCCATGAATCTGCACGGTTATTTTGCCAAGAACAGGATTGCTTATG 947
Query 55153 A-ATCTCCTGAAGCTCTAGATTTCGTTAGAACTTTCTATATGGCAGTAAACTACTATTCT 55211
| | ||| ||||| ||||| || | || |||| |||| | | || || ||||
Sbjct 948 AGAGCTCG-GAAGCCAAGGATTTTGTACGTACCTTCTTTATGACCATGAATTATCATTCC 1006
Query 55212 ATTGAGAAAAGTATGATGATCGCTAAAGAAACTGGGGTTAAGTTTAAAGACTTTGAAAGA 55271
| |||||||||||| | | || | |||| || ||| | | |||||
Sbjct 1007 CTGGAGAAAAGTATGGAGTTTGCAATGCAAACCGGCCAACGGTTCCATGGATTTGAGGAG 1066
Query 55272 TCAGAATATGCAAAAGGTACTTATTTTGCTAAATATCTTAAAAACGATTACTCTCCTAGA 55331
|| || ||||| | ||| ||||||| | ||| | | | |||||| ||| |
Sbjct 1067 TCCGACTATGCGACTGGTGTATATTTTGATCGTTATGTGACCACGGATTACCGTCCCAAC 1126
Query 55332 ACTGAAAAAATCAAACAAATGTTTGATGGAATTGAAATTCCTTCTCAATCAGATTGGGAG 55391
|| ||| | ||||| ||||| | |||||||| ||||||| | |||||| |
Sbjct 1127 ACATCGAAAGTACAACAATTGTTTAACGGAATTGATGTTCCTTCGCCCGATGATTGGAAA 1186
Query 55392 AATTTAATGTTTGATGTTAAGAAATATGGTTTATACCATGCTTACCGTCTGGCAACAGCA 55451
| | | ||| | || | | || |||| | || ||||| || || |||| | ||
Sbjct 1187 CAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATGGCTATTGCT 1246
Query 55452 CCAACACAAAGTATTTCTTATATTCAAAATGCAACGCCAAGTGTTATGCCAATTGTAGAT 55511
|||||| ||| || |||||||| ||||||||||| | ||||| ||||| ||||||||
Sbjct 1247 CCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCCATTGTAGAA 1306
Query 55512 CATATTGAAGCTAGAACATATGCTAACTCTACAACATACTATCCAATGCCTTATTTGTCA 55571
|| ||||| | |||| ||||| || || || || || ||||| ||||| ||||| |
Sbjct 1307 CAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCCTATTTACAA 1366
Query 55572 TTAGATACTTTCTGGTATTATAAATCAGCATATAATACAAATCAATTTAAATTAATTGAC 55631
|||| | ||| ||||| |||||||| ||| | | ||||||| || |||||||
Sbjct 1367 AAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAGGTAATTGAT 1426
Query 55632 ATTATTGCTGAAATGCAAGAACATGTAGACCAAGGTATTAGTACAATTTTATATGTAAAT 55691
| ||||| || || || ||||| |||||||| || |||||| | |||||||
Sbjct 1427 TTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTCCACAATTCTTCATGTAAAC 1486
Query 55692 AGCGATATTACCACTAGCGAATTAGCTAGATATTATATTTATGCAAGTGAAAAAGGATTA 55751
|| ||| | ||||| | ||||| ||| | | ||| | ||||| | | ||||| ||
Sbjct 1487 AGTGATGTATCCACTCGAGAATTGGCTCGCTGTTACCTGTATGCTGCTCATAAAGGGTTG 1546
Query 55752 AAGAGTCTTTACTACACTAGAACGAATAA 55780
|| ||| ||||| || ||||| || ||
Sbjct 1547 AAATCTCTGTACTATACAAGAACCAACAA 1575
>seq1346
Length=1390
Score = 277 bits (306), Expect = 6e-69
Identities = 522/758 (69%), Gaps = 26/758 (3%)
Strand=Plus/Plus
Query 188450 AATTAAAATGTTCATTCTGTGGGAAGCCGCAAGAGCACGTTCGTAAATTAGTTGCAGGTC 188509
|||| ||||| || || || || || | || || || || || ||| | || || || |
Sbjct 634 AATTGAAATGCTCTTTTTGCGGTAAATCTCAGGAACAGGTGCGCAAACTGGTCGCTGGAC 693
Query 188510 CAAATGTTCACATTTGTGATGAATGTATTAGTTTATGTTCTGAAATTGTTGAAGAGGAAT 188569
|| ||| ||||||||||||||||||| | || ||||||| ||||| || ||
Sbjct 694 CAGGCGTTTACATTTGTGATGAATGTATCGAACTTTGCACTGAAATCGTTGAGGAAGAGC 753
Query 188570 TAGAGACA--ACTGAAGAATT----CTCAATGGAAGATGTTCCACTTCCAAATGAAATTG 188623
| | | || || |||||| | ||||| |||| ||||| ||||| |||||
Sbjct 754 TCG-GTCATGAC-GAAGAACTGGACCTCAA----AGATATTCCAAAACCAAAAGAAATCC 807
Query 188624 TTGAATTATTAGATAATCATATTATTGGACAAGAAAAAGCAAA-ACGTCAATTAGCTGTA 188682
||| | | || | | |||||||||| || | || || | ||| || ||||
Sbjct 808 GTGATATTCTGGACCAGTACGTTATTGGACAGGATCAGGCGAAGAAGTCT-TTGTCTGTT 866
Query 188683 TCAGTTTATAATCATTATAAGCGCATTAATGCTCTTAATGaaaaatcaaaaaatgatgat 188742
| ||||| ||||| ||||| || || || | | ||| ||| | ||| ||
Sbjct 867 GCGGTTTACAATCACTATAAACGGATCAACACAC--------AAAGCAAGAT-TGAGGAC 917
Query 188743 ggagtaaagatcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACA 188802
| | | | ||||||| ||| || | | | || ||||| ||||||||||||||
Sbjct 918 GTTGAATTG--CAAAAAAG-TAACATTTTGCTGTTAGGACCTACGGGTTCAGGTAAAACG 974
Query 188803 TTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACT 188862
|| |||| ||||| |||| | || | |||| ||| | ||||| ||||||| |||
Sbjct 975 TTGCTTGCGCAAACGATGGCCAAAATCCTTAATGTTCCTTTTGCTATTGCTGATGCGACT 1034
Query 188863 TCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATC 188922
|| || || |||||||||||||| || || ||||| || ||| | |||| | ||
Sbjct 1035 TCATTGACGGAAGCTGGTTATGTCGGCGAGGATGTAGAGAACATTCTGCTCAAGCTGATT 1094
Query 188923 CAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTA 188982
||||| ||||| || ||| | ||| ||| || || || ||| | |||||||||||| |
Sbjct 1095 CAAGCTGCTGACTATGATGTGGAAAAAGCAGAGCGCGGCATTATTTATATCGATGAAATT 1154
Query 188983 GATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGA 189042
|||||| | || | ||||| || | | |||||||||| || |||||||| || ||||||
Sbjct 1155 GATAAAGTAGCACGTAAATCCGAGAACCCATCCATTACACGTGATGTATCGGGTGAAGGA 1214
Query 189043 GTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGT 189102
|| || || || | || |||||| | ||||| || || || || || || ||||||
Sbjct 1215 GTTCAACAGGCGCTTTTGAAAATCCTGGAAGGAACTGTAGCTTCTGTACCACCACAAGGT 1274
Query 189103 GGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATT 189162
|| ||||| || || || || ||| | || |||| ||||| || || |||||||| |||
Sbjct 1275 GGCCGTAAGCATCCGCATCAGGAATTCATTCAAATTGATACCACCAACATCTTGTTCATT 1334
Query 189163 CTTGGTGGAGCGTTTGATGGTCTTGAAAACATTATCAA 189200
|| || || |||||||| || || | || |||||
Sbjct 1335 TGCGGCGGTGCTTTTGATGGGCTGGAGCAAATGATCAA 1372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1591776232796544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |