Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1041 143 3e-29 seq310 93.3 4e-14 >seq1041 Length=763809 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| |||| ||| | ||| || ||||| ||||| || |||||||| || | Sbjct 709429 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 709370 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || ||||| ||||| || || || | ||||||||| || || || Sbjct 709369 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 709310 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || ||| ||||| ||| | |||||||| |||||||| Sbjct 709309 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 709250 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | || || |||||||||||||| Sbjct 709249 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203 Score = 131 bits (144), Expect = 2e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || ||| ||||| ||||||||||||||| | |||| || ||| ||| Sbjct 708955 ACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 708896 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| |||||||| |||||||| || ||||| || || || |||||||| || || || Sbjct 708895 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 708836 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||||||||| || || ||||| |||||||| || Sbjct 708835 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 708776 Query 134685 CCGGT 134689 ||||| Sbjct 708775 CCGGT 708771 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || ||||| || || ||||||||||| | Sbjct 709201 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTC--CG 709144 Query 134547 ACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || | || || || |||||||| |||||||||||||||| |||||||| || || | Sbjct 709143 ACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTG 709084 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || || || ||||| ||| | |||||| || || | Sbjct 709083 GGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 709024 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || ||||| || ||||| | ||| || ||||| || ||||| Sbjct 709023 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975 >seq310 Length=625919 Score = 93.3 bits (102), Expect = 4e-14 Identities = 346/533 (65%), Gaps = 21/533 (4%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||| ||| | |||| ||||| || |||||||| || ||||||||||| || || | Sbjct 234257 CAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATT 234316 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTT---T 7680 || || ||| | ||||| ||||| | || || || |||||||| || | || | Sbjct 234317 GAGACATACAACTACATGTCGTTGAAGTACTTCACACATGCTTCGCCAACACTTTTCAGT 234376 Query 7681 GCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740 || | | || | ||| || | | || || || ||| | ||||| || ||| Sbjct 234377 GCTGGTACCCCACAGGCG---CAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGAC 234433 Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGG 7799 ||||| || || || ||| | || || | ||| || |||| || ||||| ||| || Sbjct 234434 AGCATTGATGGTATCTACGATACCCT-CAAGATATGTGCCATGATCTCCAAGAACGCTGG 234492 Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859 ||| || ||||| | || || || | | |||| || ||| | ||| || Sbjct 234493 CGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCATACATTGGCGGCACAAA 234552 Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919 ||| | | ||| |||| | | || ||| | || || | || ||| | | || | || Sbjct 234553 CGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGT 234612 Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976 |||||||| || ||||| ||| || ||||||||| | ||||||||||| || Sbjct 234613 TGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGC 234672 Query 7977 GGACATTTACGCAGTGC-TAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAA 8031 ||| | | ||||| | | | || |||||| ||||| | ||||| Sbjct 234673 AGAC-GTCATGCAGTTCATGGACCT---TCGCAAGAACCATGGAAAG-GAAGAAGTTCGT 234727 Query 8032 GCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 ||||||||| | |||| || | ||| | |||||||| |||||| ||| || Sbjct 234728 GCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGT 234780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505356843616560