Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 143 3e-29
seq310 93.3 4e-14
>seq1041
Length=763809
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| |||| ||| | ||| || ||||| ||||| || |||||||| || |
Sbjct 709429 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAA 709370
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || ||||| ||||| || || || | ||||||||| || || ||
Sbjct 709369 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 709310
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || ||| ||||| ||| | |||||||| ||||||||
Sbjct 709309 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 709250
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || ||||||||||||||
Sbjct 709249 TCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Score = 131 bits (144), Expect = 2e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || ||| ||||| ||||||||||||||| | |||| || ||| |||
Sbjct 708955 ACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 708896
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| |||||||| |||||||| || ||||| || || || |||||||| || || ||
Sbjct 708895 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 708836
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||||||||| || || ||||| |||||||| ||
Sbjct 708835 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 708776
Query 134685 CCGGT 134689
|||||
Sbjct 708775 CCGGT 708771
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || || ||||| || || ||||||||||| |
Sbjct 709201 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTC--CG 709144
Query 134547 ACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
|| | || || || |||||||| |||||||||||||||| |||||||| || || |
Sbjct 709143 ACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTG 709084
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| || || || || || || || || ||||| ||| | |||||| || || |
Sbjct 709083 GGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGA 709024
Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| ||||| || ||||| || ||||| | ||| || ||||| || |||||
Sbjct 709023 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975
>seq310
Length=625919
Score = 93.3 bits (102), Expect = 4e-14
Identities = 346/533 (65%), Gaps = 21/533 (4%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||| ||| | |||| ||||| || |||||||| || ||||||||||| || || |
Sbjct 234257 CAACAGATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATT 234316
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTT---T 7680
|| || ||| | ||||| ||||| | || || || |||||||| || | || |
Sbjct 234317 GAGACATACAACTACATGTCGTTGAAGTACTTCACACATGCTTCGCCAACACTTTTCAGT 234376
Query 7681 GCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGAC 7740
|| | | || | ||| || | | || || || ||| | ||||| || |||
Sbjct 234377 GCTGGTACCCCACAGGCG---CAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGAC 234433
Query 7741 AGCATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATACGGCGG 7799
||||| || || || ||| | || || | ||| || |||| || ||||| ||| ||
Sbjct 234434 AGCATTGATGGTATCTACGATACCCT-CAAGATATGTGCCATGATCTCCAAGAACGCTGG 234492
Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859
||| || ||||| | || || || | | |||| || ||| | ||| ||
Sbjct 234493 CGGTATTGGTCTTCATGTTCACAACATCAGGGCCACAGGCTCATACATTGGCGGCACAAA 234552
Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919
||| | | ||| |||| | | || ||| | || || | || ||| | | || | ||
Sbjct 234553 CGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGT 234612
Query 7920 AGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGC 7976
|||||||| || ||||| ||| || ||||||||| | ||||||||||| ||
Sbjct 234613 TGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGC 234672
Query 7977 GGACATTTACGCAGTGC-TAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAA 8031
||| | | ||||| | | | || |||||| ||||| | |||||
Sbjct 234673 AGAC-GTCATGCAGTTCATGGACCT---TCGCAAGAACCATGGAAAG-GAAGAAGTTCGT 234727
Query 8032 GCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084
||||||||| | |||| || | ||| | |||||||| |||||| ||| ||
Sbjct 234728 GCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGT 234780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505356843616560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |