Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1041 89.7 4e-13 >seq1041 Length=763809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/235 (69%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 27016 TATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAG 27074 ||||| ||||| || | |||| ||||| || | || || || || || || ||||| Sbjct 709435 TATTGGCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAA 709376 Query 27075 TCGCTCATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 || | | || | || |||| || ||||| || |||||| | ||||||||||| || || Sbjct 709375 TC-CGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 709317 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 ||| || | ||||| || || |||||| || | | | || | ||||| | | Sbjct 709316 CGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGA 709257 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| ||||| || || || | ||||| || || || || || || ||||||||| Sbjct 709256 TTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCATA 709202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424900333274736