Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 89.7 4e-13
>seq1041
Length=763809
Score = 89.7 bits (98), Expect = 4e-13
Identities = 163/235 (69%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 27016 TATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAG 27074
||||| ||||| || | |||| ||||| || | || || || || || || |||||
Sbjct 709435 TATTGGCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAA 709376
Query 27075 TCGCTCATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133
|| | | || | || |||| || ||||| || |||||| | ||||||||||| || ||
Sbjct 709375 TC-CGAAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTC 709317
Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193
||| || | ||||| || || |||||| || | | | || | ||||| | |
Sbjct 709316 CGGTGGGATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGA 709257
Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
||| ||||| || || || | ||||| || || || || || || |||||||||
Sbjct 709256 TTCCACTTCGAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCATA 709202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424900333274736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |