Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq310 219 5e-52
seq5553 123 3e-23
>seq310
Length=625919
Score = 219 bits (242), Expect = 5e-52
Identities = 1113/1748 (64%), Gaps = 47/1748 (3%)
Strand=Plus/Minus
Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895
||||||||||||||| || |||||||| || ||||||| || | ||||| ||
Sbjct 235978 TCGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAACCAGCGAAGTGCATGCTGGT 235919
Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955
| |||| | |||||| | ||| || ||||| || || || || ||||| ||
Sbjct 235918 AATCTTGCCCATGGTTGGCTCCTTCATATGGATGTTCAAGCTCTGAGACTGGTCGATAAA 235859
Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCCCACACAGT 118012
|| || || || ||||| | ||| || || |||| ||||| || ||
Sbjct 235858 AGCACCACGGTCAGCAGCCATCTG---CACGATGTTACGCTGGCTGATCTCCCAGACGGT 235802
Query 118013 CCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072
| ||||||| ||| | || ||||| || | ||| || ||||| ||| |
Sbjct 235801 CTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGGAGCCATTGTC 235742
Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132
|| ||| | | |||||| | || ||||||||| ||| | |||||||| ||
Sbjct 235741 AGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGAGATCCTTCAG 235682
Query 118133 GAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189
|| ||| | |||| || ||||| || || | || | ||| || || ||
Sbjct 235681 AAGCCATGGGT--TGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAGTAAATGTT 235625
Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249
| | ||||||||||| |||||||| || |||| ||| || | || |||||||| ||
Sbjct 235624 GCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGG 235565
Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTT---CCCTAATGCGTTCCTTGAG 118306
||| || || | |||||| ||| || | ||| | | | | ||| |||||||
Sbjct 235564 CATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGC---CCTTGAG 235508
Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTTG---TCTCCCCCTGCCACATATCAAACTGGAGGAT 118363
||| ||||||| || | | | ||| ||| ||||| || |||||||
Sbjct 235507 TGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCC---CACATGTCGTACTGGAGCTC 235451
Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423
|| || || |||| || || ||||||| || || || ||| || | ||
Sbjct 235450 GCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTC 235391
Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483
| | ||||| || || || |||||||| || |||||||| | ||| | ||||
Sbjct 235390 GCATGAAGCCTCAAGAGCAGCATGATACATGGTCTCAAAAATCTGGATATTAAGCTCCTT 235331
Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543
|||||| || || || | | ||| | || |||| || ||||| | |||
Sbjct 235330 GGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGAC 235271
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAA 118602
||| || ||||| || || || | | || ||| || || ||| || || ||
Sbjct 235270 ACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACTGGGTAGT 235212
Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662
| || | ||||| | | || || || ||||| || || |||| || ||||| |
Sbjct 235211 AGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTT 235152
Query 118663 TTTCGTAATCAAAA-CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 118721
| | | | |||||| | || |||| | ||| || | || || || | || |||
Sbjct 235151 TCTTGAAGTCAAAAACCTCGT-TCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCC 235093
Query 118722 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTT 118781
||||| || |||| | |||||| | ||| |||||| || || || |||||||| ||
Sbjct 235092 AGATTGCAGACAGCGACCTCATCTGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTA 235033
Query 118782 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 118841
|| ||||| |||||||| | ||||| ||||| ||| ||| || ||||||||
Sbjct 235032 GAGCTCTTGATGGTGCCAAGATTCTTCTGATTGCTCTTGCGGTTGGCGGCGTCCTTGTAC 234973
Query 118842 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCA 118901
|| ||| | || || || ||||| || || | || ||||||||| | ||| | | |
Sbjct 234972 AGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTCTGA 234913
Query 118902 GCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAAC 118961
|| | || || | | | || ||| ||| || ||| || | | |||
Sbjct 234912 GCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAAC 234853
Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTG 119020
|| ||||| | || || || || || || || |||| || | |||| |||
Sbjct 234852 TCGTCACCGTAAACATCCGACAGACCAGG-GCATTCGTTGGGGCACATCAGAGTCCAAGT 234794
Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080
|| || || || |||| ||| ||||| || || |||||||| || |||| | |||
Sbjct 234793 GCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATC 234734
Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140
|| ||| ||||||| | || || || || | |||| || | ||||| ||
Sbjct 234733 GCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTC 234674
Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA------CCAGCCTG 119194
|| |||||||| || ||||| | || | | | ||| |||| ||| ||||
Sbjct 234673 TGCATGCCACGGCTCAAGGTAGATGGCAAAAG-CACCTG--GACGCTTGTTGCCACCCTG 234617
Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254
|| || || | |||||| |||| | || || |||||||| | | ||| | ||||
Sbjct 234616 GTCAACGTAACGAGCAGTGTTGTTATAGACTCGTAGCATTGGTACAAGACCGTTGGATGT 234557
Query 119255 GCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312
||| ||||| || | ||| | ||| || |||| |||| | ||| | || | ||||
Sbjct 234556 GCCGTTTGTGCCGCCAATGTATGAGCCTG--TGGCCCTGATGTTGTGAACATGAAGACCA 234499
Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372
||||| || || ||| ||||| || || | |||| | ||||||| |||||
Sbjct 234498 ATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATACCATCA 234439
Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACC 119431
|| |||| |||| | || | | ||||||| | | || | |||| || |||||
Sbjct 234438 ATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCG-CCTGTGGGGTACC 234380
Query 119432 AGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGG-GACATCTTGTCGTAGG 119490
||| |||| || ||||| | || || |||| ||| | ||||| | || ||| |
Sbjct 234379 AGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGTTGTATG 234321
Query 119491 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550
|||| | | || |||||||||||| ||||| |||| | || ||||| | ||| |
Sbjct 234320 TCTCAATCGCTGCTTCAATGTCTTCCCCATGAATGCCGACAGCCACACGCATGATCATCT 234261
Query 119551 ATTGGGGT 119558
||| |||
Sbjct 234260 GTTGCGGT 234253
>seq5553
Length=468990
Score = 123 bits (136), Expect = 3e-23
Identities = 528/819 (64%), Gaps = 29/819 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||| ||||||||||||||||| ||||| ||| ||| || ||||||||
Sbjct 199100 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCATG 199041
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | ||| | | ||| || | | | | | | ||
Sbjct 199040 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCTAACAGT------ 198987
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| ||||| | |||| | |||||||| | ||||| | | |||||| || | ||
Sbjct 198986 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 198927
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
|| ||||| || ||||| | |||| ||| ||| || || || || | ||||
Sbjct 198926 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGATG 198867
Query 129962 GCGTG---AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCA 130018
|| || || || || | || | || || | | ||| || |||
Sbjct 198866 CTCTGCACAAGGGCCTG-GTTC--GGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCG 198810
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || ||| | ||||| |||||||||||||| || |||||||| || || | |
Sbjct 198809 AAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCC 198750
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|||||||| || ||||||| |||||| || ||| ||| || |||||||||||||| |||
Sbjct 198749 ATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCC 198690
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197
|| || || || |||| |||||| || || | || | |||| | || |||
Sbjct 198689 TCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATG-TCGAGTTCTTGTCAGAAATCCA 198631
Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 130256
|| |||||| | ||||| | ||| || |||| | | | ||| || || ||
Sbjct 198630 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 198571
Query 130257 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 130316
|| ||| | || ||| || ||||||| |||| ||||| |||||||| |||
Sbjct 198570 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 198512
Query 130317 CATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 130375
|||| | | ||| || | ||| | ||||||| | || || || |||||
Sbjct 198511 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 198453
Query 130376 ACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434
|||||| || || | | || ||||| ||||| |||||||| | || ||
Sbjct 198452 ACCTCA-GAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAA 198394
Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491
|| || |||| | ||||| |||| | ||||| | | | ||||||||
Sbjct 198393 GAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTC 198334
Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|| ||||||||||| ||||| | |||||| || |||||
Sbjct 198333 GTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 198295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618384349165680
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