Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq310 302 5e-77 seq5553 111 2e-19 seq2822 93.3 5e-14 seq5907 86.0 7e-12 >seq310 Length=625919 Score = 302 bits (334), Expect = 5e-77 Identities = 914/1389 (66%), Gaps = 41/1389 (3%) Strand=Plus/Plus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| |||||||||||||||||||| | | | |||||| Sbjct 234263 ATGATCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATTGAGACA 234322 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 ||| || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 234323 TACAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 234381 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 234382 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 234438 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 234439 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 234498 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || |||| | ||| || || | || ||||| || Sbjct 234499 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 234556 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | |||| ||| || || || || | Sbjct 234557 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGAC 234616 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| ||||| || Sbjct 234617 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCATGCA 234673 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 234674 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 234732 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 234733 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 234792 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| ||||| | Sbjct 234793 CACTTGGACTCTGATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTTTACGGTGACG 234851 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 234852 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234911 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 234912 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234971 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| ||||| |||||| | || |||||||| | Sbjct 234972 TGTACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCT 235031 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | ||||||| ||||| || || | Sbjct 235032 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATC 235091 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 235092 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 235151 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 235152 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 235211 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 235212 ACTACCCAGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 235270 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 235271 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 235329 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| | ||| | || ||||||||||||||||| || ||||||||||| ||| Sbjct 235330 CAAGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTCTTGAGGC---TTC 235386 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 235387 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 235446 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 235447 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 235503 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 235504 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 235563 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 235564 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 235623 Query 105589 GAACATCTA 105597 ||||| || Sbjct 235624 CAACATTTA 235632 >seq5553 Length=468990 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 198664 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 198722 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 198723 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 198782 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 198783 CCGTGATGAGGGCATGCACACAGACTTCGC 198812 >seq2822 Length=903299 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 323017 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 322958 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA- 169286 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 322957 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 322899 Query 169287 GATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTA 169345 | || |||| ||| ||| || | ||| || || |||||||| ||||| | Sbjct 322898 GTTC--TGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGA 322841 Query 169346 CACTTCCCACGAAGAGGGAAGACACC 169371 ||| || ||||| ||||||||||| Sbjct 322840 ATCTTACCCCGAAGTGGGAAGACACC 322815 >seq5907 Length=3914 Score = 86.0 bits (94), Expect = 7e-12 Identities = 241/369 (65%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582 ||| ||||| || |||||||| || | || || || || || | || ||||| || Sbjct 28 ACGGTCAAAACGTCCTGGACGCAGCAAGGCAGGGTCCAGAATGTCTGCACGGTTCGTAGC 87 Query 9583 GGCGATGACAACAATACCTGTTTCATTATCA---AAACCATCCATCTCTGTCAAAAGTTG 9639 || | || | ||||||| ||||| | ||||||||||| || | | || Sbjct 88 TGCAACGATGATAATACCT---TCATTGGCTCCGAAACCATCCATTTCAACGAGCAACTG 144 Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC 9699 ||| | |||||||| ||||| || | | | |||||||| || || ||| Sbjct 145 GTTGAGTGTTTGTTCACGTTCGTCGTGACCACCACCAAGACCAGCACCACGCTGACGTCC 204 Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAA 9759 || |||||||| ||||| || |||| ||| ||||| |||| || |||||| Sbjct 205 TACCGCATCAATTTCATCGATAAAGATGATACATGGGGCGTTTTTCTTCGCATTTTCAAA 264 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 | || |||||||| || || ||||| |||||||| || || |||| | |||| Sbjct 265 CAAGTCACGTACACGAGATGCACCGACACCGACAAACATTTCAACGAAGTCAGAACCGGA 324 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 | || ||| || ||| | ||||| |||| || || ||||| | || ||||| Sbjct 325 AATGCTGAAGAATGGTACACCCGCCTCACCGGCAACAGCACGAGCGAGCAAGGTTTTACC 384 Query 9880 CGTACCTGG 9888 ||||| || Sbjct 385 TGTACCCGG 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583212841380720