Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1118 145 2e-29 seq2799 122 3e-22 seq1041 109 2e-18 seq131 104 7e-17 >seq1118 Length=940645 Score = 145 bits (160), Expect = 2e-29 Identities = 468/726 (64%), Gaps = 3/726 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || ||||| || || || || || | | | | | ||||||| Sbjct 588165 GCAATCGGTATCGACTTGGGTACCACGTACTCCTGCGTGGGTATCTTCAGAGATGATCGC 588106 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || || || || ||||| || ||| | ||||| || |||| ||| || || || Sbjct 588105 ATCGAGATCATCGCCAACGATCAGGGCAACCGCACAACACCCTCATTCGTCGCCTTCACA 588046 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | || |||||| |||| || || || | || || ||| ||| Sbjct 588045 GACACCGAGCGTCTAATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCAGCAAAC 587986 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || || || |||||| | || || | | || ||| | ||| | Sbjct 587985 ACAGTCTTCGACGCAAAGCGATTGATCGGCCGCAAGTTCCAAGACGCAGAGGTGCAAGCA 587926 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || ||||| || | || | || | ||| || ||| | || | Sbjct 587925 GATATGAAGCACTTTCCCTTCAAGGTCATCGAGAAGGCCGGC---AAGCCAGTCATCTCG 587869 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 || || | || || || | || || || ||| || || || || | ||| || | Sbjct 587868 GTCGAGTTCAAGGGCGAGGAGAAGCAGTTCACACCAGAGGAGATCTCCGCCATGATTCTC 587809 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | || || | || | |||| || || | | || || | Sbjct 587808 ACAAAGATGCGTGAGACCGCAGAGTCGTACCTTGGTGGCACCGTCAACAACGCCGTCGTC 587749 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || ||||| ||||| || || | ||||| ||||| || || || ||| |||| Sbjct 587748 ACGGTTCCAGCATATTTCAACGACTCGCAGCGACAAGCAACCAAGGACGCCGGCCTCATT 587689 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || || || || || ||||| ||||| ||||| || || Sbjct 587688 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCGACTGCAGCAGCCATTGCCTACGGT 587629 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || ||| || ||| | || || || ||| | ||||||||||| Sbjct 587628 CTCGACAAGAAGACTGAGGGCGAGCGCAATGTGCTCATCTTCGATCTTGGTGGTGGTACC 587569 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || |||||||| || || ||| |||| ||||| ||||| || || || | ||||| ||| Sbjct 587568 TTCGATGTATCGCTGCTCACAATTGAGGAGGGTATTTTCGAGGTCAAGTCCACTGCCGGT 587509 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| || || || || || || || || || || || || ||| Sbjct 587508 GACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTTGTCAACCACTTCGTAAACGAA 587449 Query 349919 TTTAAG 349924 || ||| Sbjct 587448 TTCAAG 587443 >seq2799 Length=1385 Score = 122 bits (134), Expect = 3e-22 Identities = 214/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Minus Query 349576 TGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTT 349635 ||||||||||||| | ||| |||| |||||| | || ||||| || |||||||| || || Sbjct 455 TGCTGAAGCATATCTGGGTCAAACGGTAACTCAAGCAGTTATCACGGTACCAGCTTACTT 396 Query 349636 TAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCT 349695 ||||| ||||||| ||||| |||||||| || | || || || | | ||||| Sbjct 395 CAATGACAGCCAGCGTCAAGCAACCAAAGATGCAGGTAAAATCGCAGGTCTGGAAGTTCT 336 Query 349696 AAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGA 349755 | || | || || || || || ||||| | ||||| || | || ||| Sbjct 335 GCGTATCGTCAACGAGCCAACAGCAGCAGCTTTGGCATACGGTATGGAGAAA------TC 282 Query 349756 CCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACT 349815 | |||| ||| ||||| | | ||| || ||||| ||||| || || ||||| | || Sbjct 281 CGAAGACCAAACGATTCTCGTATATGACTTGGGTGGCGGTACATTCGACGTATCCATCCT 222 Query 349816 AACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGG 349875 ||| | || || | || ||||||||||| || ||||||| || || ||||| Sbjct 221 TGAACTGGGTGACGGCTTCTTCGAAGTTAAAGCGACCAGCGGTGATAACCAACTGGGTGG 162 Query 349876 AGAAGATTTTGA 349887 || || ||||| Sbjct 161 CGATGACTTTGA 150 >seq1041 Length=763809 Score = 109 bits (120), Expect = 2e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| ||||| ||| || ||||| || || || Sbjct 708977 CATACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTC 708918 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || || || || || || || || | |||||||| ||||| Sbjct 708917 GGACAGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGG 708858 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||||| ||||| |||||||| || || ||| || ||||| || || | || || | | Sbjct 708857 TGGAATGCCTTCCTTATCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGACGACT 708799 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 |||| || || |||| ||||| ||||| | ||| Sbjct 708798 CAACCTCGAGGGTAATGGTCTTGCCGGTGACTGT 708765 Score = 104 bits (114), Expect = 7e-17 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || ||||| || ||||| || || || | Sbjct 709209 TTTGCATACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGT 709150 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || || || || || ||||| || || || ||||| | Sbjct 709149 AGTCCGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGT 709090 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || || || ||||| || || | || ||||| || || | || | || Sbjct 709089 CAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTC-GCTG 709031 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || | ||||| ||||| || || || || || |||||||| Sbjct 709030 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975 >seq131 Length=300712 Score = 104 bits (114), Expect = 7e-17 Identities = 244/368 (66%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| | ||||| ||| | | | || ||||||||| | || || |||| | Sbjct 257774 CCAGAAGAGGTCTCATCCATGATCCTGGGCAAGATGAAGGAAGTCGCCGAGTCATACCTC 257833 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || |||| || || | || || | || || |||||||| || || || ||||||||| Sbjct 257834 GGCGAAAAGGTCACCAACGCAGTCGTCACAGTCCCAGCCTACTTCAACGACGCCCAGCGT 257893 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 | || || || || ||||||| || || || | || || || | | | || ||| Sbjct 257894 GCCGCTACCAAGGACGCTGGCACGATCGCCGGTCTCAACGTCCTCCGTGTCGTCAACGAA 257953 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || || || || || | || || || || || || || ||| | ||| | || Sbjct 257954 CCTACCGCCGCCGCTCTCGCCTACGGCCTCGACAA---GACCGACAAGGAACGCCAGATC 258010 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | || | |||||||||||||| ||||| || | | || | || |||| Sbjct 258011 ATTGTCTACGACCTCGGTGGTGGTACTTTCGATGTCTCCATCTTGACTGTCGACCAGGGT 258070 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 | || || ||| | ||||| || ||||| || ||||||||||| || || || || | Sbjct 258071 GTGTTCGAGGTTCAGGCAACGGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGACCAG 258130 Query 349892 CGTCTCGT 349899 ||| |||| Sbjct 258131 CGTGTCGT 258138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515126693412134