Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq310 342 6e-89
seq5553 143 3e-29
>seq310
Length=625919
Score = 342 bits (378), Expect = 6e-89
Identities = 929/1411 (66%), Gaps = 46/1411 (3%)
Strand=Plus/Plus
Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTC----CCGCGAGTCCGCGAGACA 19171
||||||| || || |||||||| ||||| || ||| | | |||| | ||||||
Sbjct 234267 TCATGCGTGTGGCTGTCGGCATTCATGGGGAAGACATTGAAGCAGCGATT----GAGACA 234322
Query 19172 TACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGT 19231
||| || ||| ||||| |||||| || || |||| || ||||||| || |||
Sbjct 234323 TACAACTACATGTCGTTGAAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGT 234382
Query 19232 ACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAG 19291
|| | ||||| | | ||| ||| | ||||| ||||||||||||||||||||
Sbjct 234383 ACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGAT 234442
Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351
|| |||||||| || |||||| || || ||||||||| | || ||||| ||
Sbjct 234443 GGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGT 234502
Query 19352 ATCCACTGCTCG-AATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410
| || || || || ||| || | | || || || || || ||||| | |
Sbjct 234503 CTTCA-TGTTCACAACATCAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATC 234561
Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470
| ||||| | || |||||||| || |||| |||||||| || | ||||| |||||||
Sbjct 234562 CAACGGTCTTGTACCAATGCTACGAGTCTATAACAACACTGCTCGTTACGTTGACCAGGG 234621
Query 19471 GGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTC 19528
||| ||| || || | ||| || ||||||||||| ||||| ||||| || ||||||
Sbjct 234622 TGGCAACAAGCGTCCAGGTGCT--TTTGCCATCTACCTTGAGCCGTGGCATGCAGACGTC 234679
Query 19529 ATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTC 19588
||| | ||| | || || ||| |||||| || | || || | || ||||| |
Sbjct 234680 ATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGATTTG 234739
Query 19589 TTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGG 19648
||| || | |||||||| || || || ||| || || || || ||| |||
Sbjct 234740 TTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACTTGG 234799
Query 19649 CACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAAT 19708
||||||||||| ||||||||||||| || | || || ||||| || | ||||||
Sbjct 234800 ACTCTGATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTTTACGGTGACGAGTTCAAG 234859
Query 19709 GAGTTGTACCGGACTTA------CGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCC 19762
||| ||||| | ||| | || | ||||||| || ||| || ||
Sbjct 234860 GAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCT 234913
Query 19763 CGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGC 19822
| | | | ||| | | ||| | ||| ||||||||||||||| | |||
Sbjct 234914 CAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTG 234973
Query 19823 TACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCC 19882
|||||||||||||| ||| |||| ||||||||||| | ||| | |||||| ||
Sbjct 234974 TACAAGGACGCCGCCAACCGCAAGAGCAATCAGAAGAATCTTGGCACCATCAAGAGCTCT 235033
Query 19883 AACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTG 19942
|| |||| ||||| ||||||||| || || || ||| || || || ||||||
Sbjct 235034 AATTTGTGCACTGAGATCATGGAGTACTCTGCTCCAGATGAGGTCGCTGTCTGCAATCTG 235093
Query 19943 GCGTCCCTGTGC-CTGCCGACTTTCG------TCAAGGCCTCCTCCTTCGACTTTGCCAA 19995
|| || || ||| ||||| || | || || || | || ||||| ||
Sbjct 235094 GCTTCGCT-TGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAA 235152
Query 19996 ATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTT 20055
| | ||||||| ||| || ||||| ||||| ||||| |||||| ||||
Sbjct 235153 ACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTA 235212
Query 20056 TTACCC-GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCG 20114
||||| | | | | ||| || ||| || | |||||||| || || | | || |
Sbjct 235213 CTACCCAGTACCA-GAGGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTG 235271
Query 20115 TCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGC 20174
|| | || || || || | ||| || ||| || | |||||||| || ||||
Sbjct 235272 TCAACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCA 235331
Query 20175 GCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCG 20234
||||| || | || || ||| || |||| || || || || || || ||||
Sbjct 235332 AGGAGCTTAATATCCAGATTTTTGAGACCATGTATCATGCTGCTCTTGAGGCTTCATGCG 235391
Query 20235 AACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTA 20294
| || || | || ||| || |||||||| | | || || || | || ||||
Sbjct 235392 AGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 235451
Query 20295 TCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGA------GTTTTGGAGCGCCCTCA 20348
|||||| |||||||||||| ||| | || | ||| ||| ||||
Sbjct 235452 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCTCTGGGACTGGGCCGCACTCA 235511
Query 20349 AGGTTGAGATCAAGACC--CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGAC 20406
||| ||||| | || ||||| | ||||||||| | ||||| ||||| ||||| ||
Sbjct 235512 AGGGCAAGATC--GCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAAC 235569
Query 20407 CGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACAT 20466
||||||||| | ||||||||||| |||||| |||||||| ||||| | ||||||
Sbjct 235570 AGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACAT 235629
Query 20467 CTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497
|||| |||||| |||| || ||||||
Sbjct 235630 TTACTCTCGTCGTGTGTTGGCTGGCGAGTTC 235660
Score = 331 bits (366), Expect = 1e-85
Identities = 880/1330 (66%), Gaps = 32/1330 (2%)
Strand=Plus/Minus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566
||||||||| |||| || || ||| |||||| | ||||| |||||||| |||
Sbjct 235660 GAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTC 235601
Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626
||| ||||||||||| | ||||||||| || ||||| || || || || || || ||
Sbjct 235600 GTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTT 235541
Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAG----GCC--GTCCCAAAATTCATTCGC 78680
|| | ||| ||| ||||| | |||| || ||| |||||| | || | |
Sbjct 235540 GCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGG 235481
Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740
| | ||||||||||| || || |||| || | || || || | | ||
Sbjct 235480 AGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGT 235421
Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800
|||||||| || || || || || |||||||| | || || || || ||||
Sbjct 235420 CTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATACAT 235361
Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAG 78860
| ||| || || | || ||||| |||| | | |||||| | | || |||
Sbjct 235360 GGTCTCAAAAATCTGGATATTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAG 235301
Query 78861 CATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTT 78920
|| |||| |||| || || || | ||| || | | | || ||||||||||| | |||
Sbjct 235300 AGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTT 235241
Query 78921 GCTCTTTCGGGCCGCCTCGGTC-GGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTAC 78979
||||||||| ||| | | | | ||||| |||| |||||| |||||||||||
Sbjct 235240 GCTCTTTCGTGCCTC-TGGTACTGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTAC 235182
Query 78980 GCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGAT--TTCCTTTGAT 79037
| ||||| || || ||||||| | ||| ||| |||||| | ||| | |||
Sbjct 235181 GTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTC--TCGAT 235124
Query 79038 GA--AAGTCGGTAGGCACAGC----GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCT 79091
| | || ||| |||| ||| || ||||| ||||| || || ||| || ||
Sbjct 235123 GTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCTGGAGC 235064
Query 79092 AGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTG 79151
||| ||| ||||| || |||||||||||||| |||||||||||| | ||||||||
Sbjct 235063 AGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTG 235004
Query 79152 GTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG 79211
|||||||| ||| |||||||||||| ||| | || || |||||||| |||
Sbjct 235003 ATTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTG 234944
Query 79212 ACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTG 79271
|| ||||| | | ||| || | | | || || |||| ||| || | || ||
Sbjct 234943 CGCCTCGAGAATAGCATACCATATTTTCTGAGCACG---AACCGTCT--CACGGCCCTTG 234889
Query 79272 -----TGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGG 79326
| | || | ||||| ||| ||||| | || || || ||||| | |||
Sbjct 234888 CCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAAACATCCGACAGA 234829
Query 79327 CCCGGGCACTCGTGCGGGCACATCAG-GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCAT 79385
|| ||||| |||| ||||||||||| || | ||| | ||| || || || || |||
Sbjct 234828 CCAGGGCATTCGTTGGGGCACATCAGAGTCCAAGTGC-CGTTCTGTTCGACACGCTGCAT 234770
Query 79386 GAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCC 79445
||||| || || ||||| || || ||| | ||||| ||| | || || | ||
Sbjct 234769 AAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCC 234710
Query 79446 CTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGAT 79505
|||||| || || || | || | ||||| ||| || ||||||||||| || |||||
Sbjct 234709 ATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCATGCCACGGCTCAAGGTAGAT 234650
Query 79506 GGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAA 79565
||| || | ||| |||||| ||| ||||||| ||||| || || |||||||| |
Sbjct 234649 GGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGAGCAGTGTTGTTATA 234590
Query 79566 AACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACC 79625
||||| ||||| || || | |||| || |||||| || ||| || || ||
Sbjct 234589 GACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCC 234530
Query 79626 GCTCGCCCGAATGTT-CGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCG 79684
| |||| ||||| || || || | || || || || | ||||||||| |
Sbjct 234529 TGTGGCCCTGATGTTGTGAACA-TGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGG 234471
Query 79685 CGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGA 79744
| || |||||| || |||||||| || || || ||| |||||||| || |||| ||
Sbjct 234470 CACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGA 234411
Query 79745 AGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCG 79804
||||| | | ||| | | ||||| || |||| || || |||| || || |
Sbjct 234410 AGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTG 234351
Query 79805 TGAAGAACTT 79814
||||| ||||
Sbjct 234350 TGAAGTACTT 234341
>seq5553
Length=468990
Score = 143 bits (158), Expect = 3e-29
Identities = 538/824 (65%), Gaps = 30/824 (4%)
Strand=Plus/Plus
Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAG-ACCTGAAGGATTGGGACAAGC- 59670
||||||||| | | ||||||||||| || | || || | || | || ||| ||||||
Sbjct 198289 TCATTCTGGACAGCTGAGGAGATTGATCT-GTCGAAGGATCTCCACGACTGGAACAAGCG 198347
Query 59671 --TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGA 59728
|||| ||||||| | |||||| ||||| || |||||||| || ||
Sbjct 198348 ACTCAACGACGACGAACGATTCTTCATCTCACACGTCCTCGCATTCTTCGCCGCATCCGA 198407
Query 59729 TGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGC 59788
||| ||||| | || || | | | | ||| | || || ||||| | |||||
Sbjct 198408 TGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGC 198467
Query 59789 CCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCT 59848
|| | ||||||| | ||| | | ||| |||||||||||||| || || ||
Sbjct 198468 ACGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACATATTCCCT 198527
Query 59849 CATGATCGATAAGTTGGTCAAGGATCCGGA--AGAGAAGGCTGGTCTGTTCCGTGCCATA 59906
| ||||||| | ||| || || | || ||| | |||||| ||||||
Sbjct 198528 TCTCATCGATACATACATCAGCGAGCCAAAGCAGCGAA--CATACCTGTTCAATGCCATC 198585
Query 59907 GAGA-CGTCCCCCGCAGTTAAACAAAAAG-CAGAATGGGCCATGCAGTGGATGAGTCCTG 59964
|| | | |||| ||| | || ||| | || ||||| ||| ||||| | |||
Sbjct 198586 GACAACATCCCATGCA--TCCGCAGGAAGGCTGACTGGGCGTTGCGATGGAT---TTCTG 198640
Query 59965 G--AGCAT----CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCT 60018
|| | |||| || | |||||||| || ||||| ||| || || |||||||
Sbjct 198641 ACAAGAACTCGACATTCGCCCTCCGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCT 198700
Query 60019 TCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGA 60078
||||||| || || |||||| |||||||| || || ||||| |||||| | || || |
Sbjct 198701 TCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCA 198760
Query 60079 GTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGC 60138
||||| |||||||| || ||||| || |||||| | || || || || || |
Sbjct 198761 CATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCACACAGACTTCGC-CTG-CCT 198818
Query 60139 TCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATATTCACA-AGATTGTTCAGTGG 60197
||| ||| | | | | || | ||| ||| | | || || | ||| |
Sbjct 198819 TCTGTTCTCGCATCTGAAGAACAAGCCGAACCAGGCCCTTGTGCAGAGCATCATCACCGA 198878
Query 60198 GCTTGTGAAG-TGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTAT 60256
| || | | | ||| |||||| | ||||| || ||||||||||| || | || ||
Sbjct 198879 GGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGAT 198938
Query 60257 GGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATG-GCCCAGT 60315
| ||||||| ||| | || |||||| | || ||||| || ||||| || || |
Sbjct 198939 GAACGCTGGCCTCATGTCACAATACATTGAATTCGTCGCCGATCGCCTACTGTTAGCACT 198998
Query 60316 TTGGAGAAGGACCAATT-TACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCG 60374
| | | || | || ||| || | ||||| ||||||| ||||||| ||| |||
Sbjct 198999 CGGCAACAAGA--AGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCG 199056
Query 60375 TTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418
||| || |||||||||||||| |||||||| || || || ||
Sbjct 199057 CTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 199100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548479697548320
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