Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq1007 95.1 3e-15 >seq1007 Length=2700 Score = 95.1 bits (104), Expect = 3e-15 Identities = 212/315 (67%), Gaps = 5/315 (2%) Strand=Plus/Minus Query 35881 ATCGGCAGACTGACGAGAGATCCGGAATTAAGATATACTCCATCCGGTGTAGCTGTCACC 35940 |||||| | | || | ||||| || || | ||||||||| | || ||||| || || Sbjct 1405 ATCGGCCGGTTAACCCGGGATCCTGAGTTGCGTTATACTCCAGCTGGAGTAGCAGTTACG 1346 Query 35941 AAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACCAGCAAACGCGTGAGCGAGAGACG 36000 | ||||| |||| || ||| | |||| || | ||| | | | || || || || Sbjct 1345 CAATTTACTTTGGCAGTGGACAGACCGTTTACAAGCCA---AGGGGGAGAACGGGAAGCG 1289 Query 36001 GATTTCATTAATATCGTGACGTGGAGACAAACCGCGGAAGCCTGTGCCAATCACCTTCGC 36060 ||||||||| |||| || |||||||| || || | ||||| || || | ||| Sbjct 1288 GATTTCATTCCGGTCGTAACCTGGAGACAGCTTGCTGAGACTTGTGCAAACTACTTGCGC 1229 Query 36061 AAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCAGGTGCGTAATTATGAGAACAATGAG 36120 ||||| || | | ||||| |||||| | || || || || ||||| ||||| || || Sbjct 1228 AAAGGACGCCTAGCTGCAGTCGAAGGACGCATTCAAGTACGGAATTACGAGAATAACGAA 1169 Query 36121 GGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGATAATGTGCGCTTTCTT-GAATCAAG 36179 || | | || || ||||| || | || ||||| || || |||||| || ||| Sbjct 1168 GGAAAACGTGTATACGTGACCGAAGTCATTGCCGATAACGTCCG-TTTCTTGGAGTCAGC 1110 Query 36180 TAAAAATGAAAATAA 36194 ||| ||| ||||| Sbjct 1109 TAACCGTGATAATAA 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141464148841596