Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_028746.1
Length=44249
Score E
Sequences producing significant alignments: (Bits) Value
seq1007 95.1 3e-15
>seq1007
Length=2700
Score = 95.1 bits (104), Expect = 3e-15
Identities = 212/315 (67%), Gaps = 5/315 (2%)
Strand=Plus/Minus
Query 35881 ATCGGCAGACTGACGAGAGATCCGGAATTAAGATATACTCCATCCGGTGTAGCTGTCACC 35940
|||||| | | || | ||||| || || | ||||||||| | || ||||| || ||
Sbjct 1405 ATCGGCCGGTTAACCCGGGATCCTGAGTTGCGTTATACTCCAGCTGGAGTAGCAGTTACG 1346
Query 35941 AAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACCAGCAAACGCGTGAGCGAGAGACG 36000
| ||||| |||| || ||| | |||| || | ||| | | | || || || ||
Sbjct 1345 CAATTTACTTTGGCAGTGGACAGACCGTTTACAAGCCA---AGGGGGAGAACGGGAAGCG 1289
Query 36001 GATTTCATTAATATCGTGACGTGGAGACAAACCGCGGAAGCCTGTGCCAATCACCTTCGC 36060
||||||||| |||| || |||||||| || || | ||||| || || | |||
Sbjct 1288 GATTTCATTCCGGTCGTAACCTGGAGACAGCTTGCTGAGACTTGTGCAAACTACTTGCGC 1229
Query 36061 AAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCAGGTGCGTAATTATGAGAACAATGAG 36120
||||| || | | ||||| |||||| | || || || || ||||| ||||| || ||
Sbjct 1228 AAAGGACGCCTAGCTGCAGTCGAAGGACGCATTCAAGTACGGAATTACGAGAATAACGAA 1169
Query 36121 GGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGATAATGTGCGCTTTCTT-GAATCAAG 36179
|| | | || || ||||| || | || ||||| || || |||||| || |||
Sbjct 1168 GGAAAACGTGTATACGTGACCGAAGTCATTGCCGATAACGTCCG-TTTCTTGGAGTCAGC 1110
Query 36180 TAAAAATGAAAATAA 36194
||| ||| |||||
Sbjct 1109 TAACCGTGATAATAA 1095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141464148841596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |