Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq4879 111 1e-19 >seq4879 Length=2170 Score = 111 bits (122), Expect = 1e-19 Identities = 174/247 (70%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 96789 AGAGGGTAAAAGAAACCACTATAAAATAGGAACGACTCT--AAGAACACAGAGGCTACAA 96846 || ||||| ||||| || || ||||| | || ||| | || | || || || | | Sbjct 2169 AGTGGGTAGAAGAATCCGCTGTAAAACA--AATAACTTTCCAAAAGTACGGAAGCGGCCA 2112 Query 96847 TTGCCATATATAAGTCTTTCTTTGTTTCAATGTTGCGGTAATATTTGTCAATGATAGACA 96906 | ||||||||||| ||||| ||||||||||| ||||| | || | | | Sbjct 2111 TCGCCATATATAAATCTTTTGAAGTTTCAATGTTCATATAATACTGACGTATAACCGTCG 2052 Query 96907 CTTTCTTTTGTAGATATTTATTCTCAGCGACCCAATCAAATACATCGTCGATTTCTTCCT 96966 |||| |||| |||||| ||| || | ||||| | |||||||| ||| ||||| || Sbjct 2051 CTTTGGTTTGCAGATATGGATTTTCTTCCACCCATTTAAATACATTGTCAATTTCCTCGG 1992 Query 96967 TTGTGGCTAATGTTGTAAAAATTGTACTATAAGATTTTGCATGGATGCCTTCCATCATTC 97026 ||| ||| ||||| |||||||| | || || ||||| ||||| || ||||||||| Sbjct 1991 TTGAGGCCAATGTAGTAAAAATACTGCTGTAGGATTTCGCATGAATTTGTTCCATCATCG 1932 Query 97027 CCATAAA 97033 ||||||| Sbjct 1931 CCATAAA 1925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429504764110798