Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_028805.1 Length=126341 Score E Sequences producing significant alignments: (Bits) Value seq4316 118 9e-22 >seq4316 Length=612 Score = 118 bits (130), Expect = 9e-22 Identities = 189/268 (71%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 111395 CTTCTCGATAGCTTTGATCAGCTTACGCTTCAAGTCTTTATCTTTCAGATCATCCTTGTG 111454 |||||| |||||||| | || ||||| || | ||| ||||| || ||||| || Sbjct 270 CTTCTCAATAGCTTTCACGAGTTTACGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATG 329 Query 111455 AAGTGTAGTCTTCAGGACACGCATGCCACAACCAATGTCAGAACCCACGATAGAGGGTGA 111514 | | ||| | | || ||||||||||| || |||||| || ||||| || || || Sbjct 330 CAAATTGGTCATATGCACCCGCATGCCACAGCCGATGTCACTGCCTACGATGGATGGAGA 389 Query 111515 AACGAATCC-GTCTT-TCATGTTCCAGACGGCGGTTGTGCCTATGCACGTCCCCACCCCA 111572 || ||||| |||| || | ||| || || |||||||| ||||| || || || || Sbjct 390 TACAAATCCACTCTTGGCA--TCCCATACCGCAGTTGTGCCGATGCAGGTACCTACACCG 447 Query 111573 ACGTGAGCATCTGGCGTATAAGACATGTGTATGTTACGCGGTATTGCAAGGTTGTTATTC 111632 || || |||| ||||| ||| ||| | ||| ||| ||| ||| ||||| ||| Sbjct 448 ACATGCACATCAGGCGTGTAACTCATATAGGAAATACCCGGGATTTGAAGATTGTTGTTC 507 Query 111633 GCCATGTCGAAGACCTTATGCTCCAATG 111660 ||||| ||||| ||||||| ||||||| Sbjct 508 GCCATCTCGAACACCTTATAATCCAATG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404133998232316