Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq274 149 6e-31 >seq274 Length=1342 Score = 149 bits (164), Expect = 6e-31 Identities = 292/432 (68%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827 |||||| | |||||| || || ||||| || | ||| || || || ||||| | Sbjct 440 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 381 Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887 ||||| | | |||| | ||||| || ||||| ||||| || |||||||| || Sbjct 380 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 321 Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947 ||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || || Sbjct 320 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 261 Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007 | ||| || || || || || | ||||| || || |||||||| | |||||||| || Sbjct 260 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 201 Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067 || | | ||||||||||| | | || | ||||||| ||||| | || Sbjct 200 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 141 Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127 || | |||| | | ||||| | |||||| | ||||| | |||||| |||| Sbjct 140 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 81 Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187 || || ||||| || || || | || |||||||| |||||||||| | | | || || Sbjct 80 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 21 Query 49188 AACCAATGGAGC 49199 ||| | ||| || Sbjct 20 AACGAGTGGTGC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988432195040