Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq274 149 6e-31
>seq274
Length=1342
Score = 149 bits (164), Expect = 6e-31
Identities = 292/432 (68%), Gaps = 0/432 (0%)
Strand=Plus/Minus
Query 48768 CATATCTGTAATGACTGCAATTGTTTTTCGATTCAGATTTTTTCCAATATCAACCATTTC 48827
|||||| | |||||| || || ||||| || | ||| || || || ||||| |
Sbjct 440 CATATCGGAAATGACAGCCATCGTTTTGCGGCCAACATTGTTACCGATGCTTACCATGGC 381
Query 48828 TTGTGCTAATGCTTTAGAGTCTTCTAATGTTTTCATAAATGCTCCATTTCCTGTTTTAAC 48887
||||| | | |||| | ||||| || ||||| ||||| || |||||||| ||
Sbjct 380 ATGTGCCAGTTCTTTTGCATCTTCCGTAGTCTTCATGAATGCACCCGCACCTGTTTTGAC 321
Query 48888 ATCTAATACAATTGCATCTGCTCCCATTGCGAtttttttACTCATAATGCTACTAGCAAT 48947
||| | ||| || ||||| || || ||| ||||| |||||||| ||| || || ||
Sbjct 320 ATCCAGTACGATGGCATCGGCACCTGCTGCAATTTTCTTACTCATGATGGAGCTGGCGAT 261
Query 48948 TAATGGAATTGAATTAACTGTTCCAGTAACATCGCGTAATGCATATAATTTTTTGTCGGC 49007
| ||| || || || || || | ||||| || || |||||||| | |||||||| ||
Sbjct 260 CAGTGGGATGGAGTTCACGGTAGCTGTAACGTCACGCAATGCATAGAGCTTTTTGTCTGC 201
Query 49008 AGGCACTAAAATTCCACTTTGTCCAACTAATGCGATTTTATGTGTATTAACTTGATTAAT 49067
|| | | ||||||||||| | | || | ||||||| ||||| | ||
Sbjct 200 TGGTGTGAGGTTGCCACTTTGTCCGATAACCGCCACTTTATGTTCGTTAACGAGTCGGAT 141
Query 49068 AAATTGTTCTCTTGTTAATTCTACGTTAAAGCCTTGTATAGATTCTAATTTGTCAATTGT 49127
|| | |||| | | ||||| | |||||| | ||||| | |||||| ||||
Sbjct 140 GAACTCTTCTTTCTCCAGCTCTACATGGAAGCCTGCAACGGATTCCAGTTTGTCTGTTGT 81
Query 49128 TCCTCCTGTGTGCCCTAAACCTCTACCTGACATTTTAGCAACAGGAATACCCAAAGAAGC 49187
|| || ||||| || || || | || |||||||| |||||||||| | | | || ||
Sbjct 80 ACCACCAGTGTGACCCAATCCACGTCCGGACATTTTGGCAACAGGAACATCGAGAGCTGC 21
Query 49188 AACCAATGGAGC 49199
||| | ||| ||
Sbjct 20 AACGAGTGGTGC 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451988432195040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |