Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_029104.1
Length=54312
Score E
Sequences producing significant alignments: (Bits) Value
seq1772 107 7e-19
seq1536 86.0 2e-12
>seq1772
Length=2858
Score = 107 bits (118), Expect = 7e-19
Identities = 379/589 (64%), Gaps = 5/589 (1%)
Strand=Plus/Plus
Query 10445 AGCAGTATCAAGCGATGGGAGCTATCCAAAATTTTGATGCTCAAAAGGACATTATTGTTT 10504
||||| ||| | || || || || |||||||||||| | ||| || || | ||||
Sbjct 671 AGCAGCTTCAGGATATCGGGGCGATTCAAAATTTTGATTCCAAAACAGATATCACTGTTG 730
Query 10505 CTCCAGGTAATGATAGTGATTCATTGCTAACTGAGGGGTATATCCAACCTGTCGATGCCA 10564
|||| || ||||| | || | || | ||| | |||||||||| ||| ||
Sbjct 731 CTCCGGGCAATGAAACCGACAGTATTCTGATCGAGATTCAGGTCCAACCTGTGGATTCCG 790
Query 10565 TGGAGAAAAACTACTTAAAGGCGGTGGTGCGATAA-ATGGCTTTTTTAAAATATGAAGAC 10623
| || ||| || | || | | |||| ||| ||| | ||||| ||| |||
Sbjct 791 TTGAAAAAGTATATATGAAAGTGAAGGTGGTTTAAGATGACATTTTTGAAAGCAAGCGAC 850
Query 10624 ACGATAAATGGTCAGGAAGGACGTGCCTACGCCACGATTAACGGTCGTGTAGAGGAAATG 10683
||||| || |||||||| || || ||||| |||||||| || | || ||||||
Sbjct 851 ACGATCTCCGGCCAGGAAGGCCGCGCATACGCAACGATTAATGGACAGACGGAAGAAATG 910
Query 10684 TTCTGGCTTAAAAAGTTCGAGGCAAAGGTAGAAAAGAACAAAAA--AGAAGGAAAGACAC 10741
|||| | || | | | || |||| ||| || | |||||||| ||| | || ||
Sbjct 911 TTCTATGTGAAGACGCTGGAAGCAACGGTGGAGA--AACAAAAAGCAGAGGTCAAAACGT 968
Query 10742 TAAACAGACGCGGTACCCAGCATAAGGCAATGGGATGGAAAGGTACAGGCAGCATGACCA 10801
| | |||||| ||||| || |||| || ||| ||| | || |||||| |
Sbjct 969 TGGGTCGCCGCGGTGTACAGCACAAAGCAACCGGTTGGTCCGGTTCGGGTTCCATGACAA 1028
Query 10802 TCTACTATGTGACCACCCTTTTCCGCCAACTTATGCTCGATTACATGAAGACAGGTAAAG 10861
||| |||| || ||| |||||| | || ||||| | |||||| ||| ||| |
Sbjct 1029 TCTTCTATACCACTTCCCGTTTCCGTGAGCTGATGCTACAGTACATGCAGAATGGTGTGG 1088
Query 10862 ACATTTACTTTGATGTTCAGATCACAAATGAAGATCCGACATCTAGTGTTGGAAAGCAAA 10921
||| ||||| || || | | || || |||||||| | |||| |||| || || |
Sbjct 1089 ACACGTACTTCGACATTGAAGTGACCAACGAAGATCCTTCCTCTACGATTGGCAAACAGA 1148
Query 10922 CTGTTGTCATCAAAGGAATTAACCTTGATGGTATTACAATGGCTCTTTTGGACATAGATA 10981
| || | ||||||| | || || || || | | ||||| |||| | ||
Sbjct 1149 CAGTAACCCTCAAAGGTGTCAATCTGGACAGTGTAATCATGGCATCCCTGGATACCGAGG 1208
Query 10982 GTGAGGACATGGAAGAGGAGATTAGCTTCACTTGGCAAGATGCTGATAT 11030
||||| |||| || || | ||||| || | |||||| |||||
Sbjct 1209 CTGAGGCGTTGGAGGAAGAAGTGAGCTTTACCTTTGAAGATGTCGATAT 1257
>seq1536
Length=2118
Score = 86.0 bits (94), Expect = 2e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 38374 CCGTTTTTCTTTTCGAACTCATCAATATGGTGTTCGATAAGATGCTCAATTTGCATAGCG 38433
|| || | |||||| || || |||||||| | || || | || ||||||||||| |||
Sbjct 1004 CCTTTCTCCTTTTCAAAGTCTTCAATATGCTTCTCAATCAAATATTCAATTTGCATCGCG 1063
Query 38434 ATTGATCGTTTGTTTTTATCAGCAATATATTTAATCTTTTCGAAGTTAGTTTCTTGTAAA 38493
| || ||||||||||| ||||| || |||||| || || || || |||||| ||
Sbjct 1064 AGGGACCGTTTGTTTTTGTCAGCGATCACTTTAATTTTCTCAAAATTCGTTTCTCTTAGC 1123
Query 38494 CGCAATGTAAAAGGACGTTTATCAGTAGCCAT 38525
| |||||| | |||||| ||||||||
Sbjct 1124 CTAGGTGTAAAGACTCTTTTATCTGTAGCCAT 1155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 173663233453864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |