Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1041 167 5e-36
seq1051 123 6e-23
seq5876 93.3 1e-13
>seq1041
Length=763809
Score = 167 bits (184), Expect = 5e-36
Identities = 172/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | || || | ||| ||||||||||| || |||||||| ||||||| |||
Sbjct 709427 TCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAG 709368
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
|||| || || || ||||||||||| |||||||| || || || ||||| || || |
Sbjct 709367 TGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGAT 709308
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
|| |||||||| ||||||||| || ||||| ||||| ||||| || ||| || ||
Sbjct 709307 GCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTC 709248
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| ||||| ||||| || ||||| ||||| || || | |||||
Sbjct 709247 GAGTGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 709203
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| ||||| || ||||| |||||||| || |||| || || | |||||
Sbjct 709186 AGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCCGACAGAGTACGACCATCC 709127
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||||||||| || || ||||| || |||||||| || | || |||||||||
Sbjct 709126 TCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 709067
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||||||||| | || |||||||| ||||| |||
Sbjct 709066 TGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 709007
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||||||||| || || | ||||||
Sbjct 709006 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 708975
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || |||||| ||| || || ||||| || || | |||||
Sbjct 708968 ACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGT 708909
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || ||||||||||||||||| || | |||||| |||||||| |||| ||
Sbjct 708908 GCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCC 708849
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||| ||||||||||| ||||| || ||||||||||| || |||||||||||
Sbjct 708848 TTCCTTATCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAG 708789
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
|| || ||||| || ||||
Sbjct 708788 GGTAATGGTCTTGCCGGTGA 708769
>seq1051
Length=501590
Score = 123 bits (136), Expect = 6e-23
Identities = 144/193 (75%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 210916 GAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGC 210975
|| || || | || |||||||| || || | ||||| | ||||| |||| |||||| |
Sbjct 97030 GAATGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 97089
Query 210976 CTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTT 211035
| |||||||| | || || ||||| || || | ||| ||||||||||||||||| |
Sbjct 97090 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 97149
Query 211036 TCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGA 211092
| || || ||||||||||| ||| || |||||||| ||||| ||||| || ||||
Sbjct 97150 TGACATTGTCGATGGTGTC---GCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGA 97206
Query 211093 GAGTCTTTACAAA 211105
| | |||||| ||
Sbjct 97207 GGGCCTTTACGAA 97219
>seq5876
Length=784347
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||| ||| || || ||||| || || | ||||| | |||||
Sbjct 203420 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 203361
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| | ||| || ||||| || |||| ||| ||||||||
Sbjct 203360 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 203302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159054305944970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |