Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07- 28] 6,578 sequences; 35,996,854 total letters Query= NC_030920.1 Length=165868 Score E Sequences producing significant alignments: (Bits) Value seq1892 172 6e-38 >seq1892 Length=2235 Score = 172 bits (190), Expect = 6e-38 Identities = 575/881 (65%), Gaps = 33/881 (4%) Strand=Plus/Minus Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836 || || | ||| || || ||| | |||||| |||||| || ||||| || ||||| || Sbjct 1987 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 1928 Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895 ||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || || Sbjct 1927 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 1869 Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955 | | |||| ||| ||||||||| ||||||| || |||||| |||| || || Sbjct 1868 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 1809 Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003 | ||||| |||| |||| || | ||||| ||| | ||| || || Sbjct 1808 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 1749 Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062 || || |||||||| || || | | || ||| |||| || || || || | | || | Sbjct 1748 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 1690 Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122 || | ||||| || | || ||||| |||||||| ||||||||||||| || | || Sbjct 1689 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 1630 Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182 | || || || ||||| | | | ||| |||| ||||| || || | || | Sbjct 1629 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 1570 Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242 |||||||| | ||| | || ||||| || ||| |||||| | || ||||||| Sbjct 1569 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 1510 Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302 | ||| |||| || || ||| | ||| || | || |||| |||| Sbjct 1509 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 1450 Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362 | || || || || ||||| |||||| ||||| || || || | | |||||| Sbjct 1449 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 1390 Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414 | |||||| | | || | || | || || || | || ||| | ||| | | Sbjct 1389 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 1332 Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473 | || | ||||| || | || | | | || || | || ||||||||||||| | Sbjct 1331 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 1276 Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533 || | || | ||||| || || | || || |||||||| || |||||||| || | Sbjct 1275 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 1216 Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592 | || || | || || | ||| | | |||||||||| || ||||||||| | Sbjct 1215 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 1157 Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633 | ||||| ||| |||| | || | ||||||||||| Sbjct 1156 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 1116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530605967336640