Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_030920.1
Length=165868
Score E
Sequences producing significant alignments: (Bits) Value
seq1892 172 6e-38
>seq1892
Length=2235
Score = 172 bits (190), Expect = 6e-38
Identities = 575/881 (65%), Gaps = 33/881 (4%)
Strand=Plus/Minus
Query 97777 ACAGTACCGGCTATCGAAATCTTTAAACGTATCATGATCTCTCAACTAGAGACAGGCACA 97836
|| || | ||| || || ||| | |||||| |||||| || ||||| || ||||| ||
Sbjct 1987 ACGGTTCAGGCGATTGACATCATGAAACGTGTCATGAAGTCCCAACTGGAAACAGGTACG 1928
Query 97837 CCTTACATGTTCTACCGTGATACAGTAAACCGTGCTAACCAAAACAA-GCACGCGGGTAT 97895
||||||||||||||||| ||||| || |||||| | || | ||||| |||| | || ||
Sbjct 1927 CCTTACATGTTCTACCGGGATACCGTCAACCGTTCGAATCCGAACAATGCACAC-GGCAT 1869
Query 97896 GATCTACTGTTCAAACCTTTGTGTAGAAATCACACAAAACCAAGGAACAACAGTCGTAAC 97955
| | |||| ||| ||||||||| ||||||| || |||||| |||| || ||
Sbjct 1868 GGTGTACTCTTCCAACCTTTGTACTGAAATCATGCAGAACCAATCTGCAACGGTAGTTGA 1809
Query 97956 AGAGGAA------ATAACAGAAGACGGTAA------GATCGTTATTACAAAAAGCCCTGG 98003
| ||||| |||| |||| || | ||||| ||| | ||| || ||
Sbjct 1808 AAAGGAAGAGCTCGTAACCAAAGATGGACAAACCCGCATCGTGATTTCCAAAGTGCCGGG 1749
Query 98004 TGACTTTGTAGTATGTAA-CTTATCTTCTATTAACTTAGCTCGCGCTGTAACAGACGAAG 98062
|| || |||||||| || || | | || ||| |||| || || || || | | || |
Sbjct 1748 CGATTTCGTAGTATGCAATCTGAAC-TCCATTCACTTGGCACGTGCCGTGCCTCATGATG 1690
Query 98063 TACTAGAGCGACTAATCCCAATTCAAATTCGTATGTTAGACAACGTAATTGAGCTGAATG 98122
|| | ||||| || | || ||||| |||||||| ||||||||||||| || | ||
Sbjct 1689 TATTGGAGCGTCTGGTACCGATTCAGGTTCGTATGCTAGACAACGTAATCGACATCAACA 1630
Query 98123 ATATCCCTGTACTACAAGCTAAGTTATCTAACCAGAAATATCGTGCAGTCGGCTTAGGTA 98182
| || || || ||||| | | | ||| |||| ||||| || || | || |
Sbjct 1629 ACATTGAAGTGCTGCAAGCCCAATACACCAACAGCCAATACCGTGCGGTTGGTCTGGGAA 1570
Query 98183 CATTCGGATGGAACCACTTACTAGCTCTTAAAAAGATTGCATGGGAAACAGACGAAGCAG 98242
|||||||| | ||| | || ||||| || ||| |||||| | || |||||||
Sbjct 1569 CATTCGGACTCCATCACCTGCTTGCTCTCGAAGGCATTCGTTGGGAATCGGAAGAAGCAG 1510
Query 98243 TAGAGTATTGTGATAGCCTTTACGAAGATATTGCTTACTTAACAGTTCAAGCTTCTATGG 98302
| ||| |||| || || ||| | ||| || | || |||| ||||
Sbjct 1509 TCACATATAACGATAATCTGTATGAAAAAATTAACTATCTGCTCGTGAAAGCCAGCATGG 1450
Query 98303 AGCTTTCAAAAGAGAAAGGTGCTTATCCTGCATTCCCTGGGTCAGAATTCGATACAGGCG 98362
| || || || || ||||| |||||| ||||| || || || | | ||||||
Sbjct 1449 AACTGTCCAAGGAAAAAGGACATTATCCGAAATTCCAAGGTTCCGATTGGCAAACAGGCA 1390
Query 98363 AGTACTTCTTCAAGCGAGGATATA--TC----GAACGTGGAG--GAAGTAACGTAAAAGA 98414
| |||||| | | || | || | || || || | || ||| | ||| | |
Sbjct 1389 AATACTTCGACCAACGGGATTACACGTCAGGTGAGCGCGTAGGCGAATT--CGTTACAAC 1332
Query 98415 AGGACGTGACTGGAACCAATTAGCTA-TCGACGTTCATGACAATGGTGTACGTAACGGTT 98473
| || | ||||| || | || | | | || || | || ||||||||||||| |
Sbjct 1331 TGAAC---AATGGAAAGAACT-GCAAGCCCAAGTACAGCAAAACGGTGTACGTAACGCCT 1276
Query 98474 ACTTAATGGCTGTAGCACCTAACGGAACTACATCTATCATTGCAGGATCAACAGCAAGTA 98533
|| | || | ||||| || || | || || |||||||| || |||||||| || |
Sbjct 1275 GGTTGTTCGCCATTGCACCAAATGGTTCAACGTCCATCATTGCCGGTTCAACAGCCAGCA 1216
Query 98534 TCGACCCTATCTTCCGTA-AGTTCTATTCAGAAGAGAAAAAGAACTACAAGATTCCGGTA 98592
| || || | || || | ||| | | |||||||||| || ||||||||| |
Sbjct 1215 TTGATCCGCT-TTACGAACTGTTGTCCTATGAAGAGAAAACGACTTACAAGATTGCCAAC 1157
Query 98593 ACTGCACCAGACTTATCGCCAGCTACAACATGGTACTACAA 98633
| ||||| ||| |||| | || | |||||||||||
Sbjct 1156 CCGGCACCTGACCTATCCGAAAAAACGATCTGGTACTACAA 1116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530605967336640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |