Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236675.1_202017-07-
28] 6,578 sequences; 35,996,854 total letters
Query= NC_031039.1
Length=251042
Score E
Sequences producing significant alignments: (Bits) Value
seq5663 163 5e-35
seq4879 154 2e-32
>seq5663
Length=1811
Score = 163 bits (180), Expect = 5e-35
Identities = 337/497 (68%), Gaps = 6/497 (1%)
Strand=Plus/Minus
Query 144814 TTTGATAAAGTTACAGAATATCCAGTTCGCATGCAAACAGTAAATAATAAAGACATCAAA 144873
||||||||||| || ||||||| |||| || ||||| || | | || || || |
Sbjct 1800 TTTGATAAAGTAACGAAATATCCGATTCGAATTCAAACGGTTGAATACAAGGATATTCAG 1741
Query 144874 GTAGCAACATCTGATGGTAAAAACATTGAAATGGATATTGCTTATAACTATGTTGTACAA 144933
| || || |||||||| || ||||| ||| ||| ||||||||||||| ||| ||
Sbjct 1740 ATTGCGACTTCTGATGGGAAGAACATCACAATTGATTTTGCTTATAACTACCAAGTAGAA 1681
Query 144934 CCAGATAAAGTAGTAGATGTATTTAATAAGTTTGGTTCAGTTAAAGTTGAACAAATTGAG 144993
||| ||||||| | |||| |||| ||||| || ||| || || ||||||||
Sbjct 1680 CCAAGTAAAGTATCTTCTATATTCAATACATTTGGGCCAATTAGCATTCAAGAAATTGAG 1621
Query 144994 AATTCATATCTTAAATCACGTTTATGGGATGCCTCTCGTAAAGTGATCTCTAAATATTCA 145053
|| ||||||| ||| ||||||| | || | ||||||||| ||||| || | | ||
Sbjct 1620 GATACATATCTCAAAACACGTTTCCGTGACTCAGCTCGTAAAGGTATCTCCAAGTTTACA 1561
Query 145054 GTAATTGATACTTATGGTCAAAAATCTTCAGAAGCGGCTAGTGAAATTCAAAAAAC-ATT 145112
|| |||||| |||||| |||| || || ||||| | |||| | || || ||| ||
Sbjct 1560 GTCATTGATGTATATGGTGAAAAGTCATCCGAAGCAG-GAGTGGATGTCCAACAACGTTT 1502
Query 145113 TGCTGAAGATATGAAGAAATATGGTTTTATTATTGATGATCTTACTTTAGGTGTGCCAAA 145172
| |||| || | || | | || |||||| | | |||| ||||||| || |
Sbjct 1501 TTCTGATGACGTTAAAGAGTTAGGCTTTATTGTATCCAACGTTACCGTAGGTGTTCCTCA 1442
Query 145173 GCCAGAT--AAAGCTACTCAAGATGCAATTGATGCTAGAGTTAAATCTTCTCAGGAATTA 145230
|| ||| ||| ||||| || ||||| ||| | ||| || | ||||| ||| |
Sbjct 1441 ACCTGATGCTAAG--ACTCAGGAAGCAATCGATAAGCGTGTTGAAGCCTCTCAAGAACTG 1384
Query 145231 GAACGTTCTCAAACTGAAATCAAGATTGCTAAAGCAGATGCTGAGAGGAAGAAAATTGAA 145290
|||||| |||||| | |||| || || ||| || || | ||| | |||
Sbjct 1383 GAACGTAAAACGACTGAACTTGAGATCGCCAAGAAAGAAGCAGAACGTAAGCGCGTGGAA 1324
Query 145291 GCTCAAGGTGTTGCAGA 145307
|| |||||| ||||||
Sbjct 1323 GCGCAAGGTAATGCAGA 1307
>seq4879
Length=2170
Score = 154 bits (170), Expect = 2e-32
Identities = 873/1376 (63%), Gaps = 43/1376 (3%)
Strand=Plus/Minus
Query 190894 ATCACTATTGACAAATAAAGTAGTAGAAATACCCTGATCAATATGTTGTTGGATTACTGC 190953
|||||| || ||| | | | || || || || || || | ||| | || || | ||
Sbjct 1492 ATCACTGTTTACATGAAGAATTGTGGAGATTCCTTGGTCCACATGCGGCTGAATCTCCGC 1433
Query 190954 AACCATGTCAATAATTTTATTTTGATCCATATCATATGCTGATTTGTAAGACCATTGAGT 191013
|| || ||||| | || ||||||||| | ||| |||||||||||| | | | |
Sbjct 1432 AATCAAATCAATTACCTTGAATTGATCCATCTGATACGCTGATTTGTAATAGAAGACA-T 1374
Query 191014 TCTACCGTC-TAGATATGGCATTGGATAGTATGTTGTAGAGTCATGATATGTTCTGTTTT 191072
| | | | || ||| ||||| ||||| || || || || | ||| |||| | |
Sbjct 1373 TATCCTTTTGTAAATAGGGCATCGGATAATACGTGGTTGAATTGGCATAGGTTCGTGTCT 1314
Query 191073 CAATTCGACTTACAACTGGCATAATAGATTGA-GTTGAATTCTGTACATAACTAATTGAC 191131
||||| | ||||| ||||| | | | || |||| ||| || | |||| || |
Sbjct 1313 CAATTTGTTCTACAATGGGCATTACAC-TGGATGTTGCATTTTGGATATAAGAGAT-GCT 1256
Query 191132 TG-TGTAGGTGCAATAGCAAGTCTATAAGCATGGTATAAACCATTTTCTTTTACTTG--- 191187
|| ||| || |||||||| | | ||| ||||| || | |||||||| | ||||
Sbjct 1255 TGCTGTTGGAGCAATAGCCATGCGATAGGCATGATAGAGGCCATTTTCCATCACTTTAAA 1196
Query 191188 -TTCTGCTAATTCAGCCCAATCTTCTTTTGTTGGAACAAAGATTCCCTCAAATAATTCTT 191246
|| ||| ||| ||||| || | |||||| ||||| | ||| |||| ||
Sbjct 1195 TTTAAGCTGTTTC----CAATCATCGGGCGAAGGAACATCAATTCCGTTAAACAATTGTT 1140
Query 191247 TTACTTTTTGACTTCTAGGTGTATAATCATTTTCGATATAACGTTTAAAATAATTACCAT 191306
|||||| | | || ||||| | | |||||| | |||||| ||||
Sbjct 1139 GTACTTTCGATGTGTTGGGACGGTAATCCGTGGTCACATAACGATCAAAATATACACCAG 1080
Query 191307 TAGCATATTCAGAATCTTCAAAACGATGGAAttttttatttttCTCAATAGCAATTTCCA 191366
| ||||| || || || ||||| | |||||| || | | || |||| ||||
Sbjct 1079 TCGCATAGTCGGACTCCTCAAATCCATGGAACCGTTGGCCGGTTTGCATTGCAAACTCCA 1020
Query 191367 TACTTCGTCTA-ATACTATGGAAATTCATAATTGCAAAGAA--TACATTGGCAAAATCTC 191423
||||| ||| | ||| ||||||| | |||||| ||| | |||||||
Sbjct 1019 TACTTT-TCTCCAGGGAATGATAATTCATGGTCATAAAGAAGGTACGTA--CAAAATCCT 963
Query 191424 TAGCTACAGCACTTTCATATGAAATACTATTTTTAGCAAGGAAACCATGTAAGTTCATTG 191483
| ||| | | || ||||| | ||| || || || |||| |||| || | ||||| |
Sbjct 962 TGGCTTCCGAGCTCTCATAAGCAATCCTGTTCTTGGCAAAATAACCGTGCAGATTCATGG 903
Query 191484 CGCCTAAACCAACTGAATGGAATAGAGCATTTGCTTTTCTTATAGATGGTGCATTTTTGA 191543
| || |||||||| ||||| | | | || ||||| || | || ||||| |
Sbjct 902 CACCCAAACCAACGGAATGCATTTCGGAGTTGGCTTTGGCTACACCAGGAGCATTGGCAA 843
Query 191544 TATCACTCTTATCTGTTACAGATGTTAAAATATCCATTGCAATATCTACAGAATCTTTAA 191603
|| || | || | || ||||| | |||| | || || || || || |
Sbjct 842 CATGCGTCATGTCGCTGACGGATGTCAGTGCGATCATTCCCTCATGAACGGATTCCTTGA 783
Query 191604 ATTTTTTAGTCTCCATTACATTAACGATATTTAATGATGCAAGGTTACAACTGATTCCCA 191663
|| | ||||||| |||||||| ||||| | || || ||||| || || || |
Sbjct 782 TCTTGCCACTCTCCATAACATTAACAATATTGAGGGAGGCCAGGTTGCAGCTAATATCTT 723
Query 191664 ATCC--TAATTCATCTTCTTCTCCATAATTATTAATTACTGA----TACTGAACTTAACT 191717
| |||| ||| || ||||| | ||||| | || | ||||| ||
Sbjct 722 TGCGGATAAT--ATCCGGTTGACCATAGTCTGTAATTTCAGAAGTCTCCTGAAGTT---- 669
Query 191718 GCATAATTTCAGTACAAAGGTTAGAGAATTTAATTTCACCAATTGCTTTTAAAGCATGTT 191777
| | || || || || ||||| || | ||| | || || | |||||| ||||||
Sbjct 668 GGAAGATCTCTGTGCAGAGGTTGGACATTTTGACTTGTCCTACGTTTTTTAAGGCATGTG 609
Query 191778 CTTTATTAGCATTTGTTTTGAAGAACAGATAAGGGTATCCTGATTCTAATTGAGTCATTG 191837
||| ||||||||| ||||| | | ||| || || || ||||| | |||| |||| |
Sbjct 608 CTTGATTAGCATTGGTTTTATTAATGATATAGGGATAGCCGGATTCAAGTTGAATCATCG 549
Query 191838 CAATTTGATTCATTAGTTTCATTGGTGATAATTCAC-ATACAAATTTCTTAATATTTGGA 191896
| |||| ||| | | | || | || || || ||||| | |
Sbjct 548 CTATTTTGGTCAGCATATCCCGTGC----ACTTAACGATTTTTTCTTCTTCACACGGTCG 493
Query 191897 TTATTAACTAATTCATCATACATTACATCTAAATCCATCTCATCTAAAGGAATTCCATAT 191956
| | | || ||||||||| ||||| | |||||| ||||| ||| | |||||||
Sbjct 492 TCAGCGAGCAACGTATCATACATCACATCCAGATCCATATCATCCAAATGTGTTCCATAC 433
Query 191957 TCTTTTTCGACACTATAAGGAGAGAATGTATAGAACTCTTC-TTCTCCTGATTCTAGCAA 192015
| || | |||||||||||| | ||| ||| || || || || ||| | |||
Sbjct 432 GCCTTATAGACACTATAAGGTGCGAAGAGATACAAGGGCTCATTATCTTGAGCC-AGC-- 376
Query 192016 TTGAATAAATTTATCAGGAACAATAATTCCAGTTGAAAGTGTTTTCATACGAATGCTATC 192075
| | ||| || |||||| |||| ||| | || || ||||||| ||| || | ||
Sbjct 375 -TTATAAAAACGATTAGGAACGATAAGTCCGATAGAGAGAGTTTTCAGACGGATTTTCTC 317
Query 192076 GTCAGCATTGAtttttttAGTATTTAGGAAATGAATAATATCCCCATGAAAAATATTAAG 192135
||| |||||||| |||||| | | || | | |||| |||| | |||||||||
Sbjct 316 GTCCGCATTGATCTTTTTACTGTCCAGCAGTTCCATAACGTCCCAACCGAAAATATTATA 257
Query 192136 ATAAACAGCTCCTGAGCCTTTGCGTTGACCCATCTGATCAGCATAAGAGAAACTTTGTTC 192195
|| | || || || || || ||||||||||||||||| || |||||||||| | ||
Sbjct 256 GTATGCTGCGCCAGAACCCTTCCGTTGACCCATCTGATCGGCGTAAGAGAAACCATCCTC 197
Query 192196 CAATAATTTCATTACAGGAATAACACCTTTAGCGGCATTTTCTTCACCATTTACTG 192251
|| | || | ||||| ||| ||||| || || ||| |||| |||| ||
Sbjct 196 CATCAGCTTGAGAACAGGCGTAATGCCTTTCGCAGCCCCTTCGACACC-TTTAATG 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 803140356353760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |